chr17 : 16,940,084 – 16,940,897
813 bp 82 TFs 4 linked genes
This 813 bp open chromatin element is linked to 4 target genes and is bound by 82 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000290698 5.2 kb Proximal Proximity
TBC1D27P 7.6 kb Proximal Proximity
MPRIP 101.9 kb Distal Multiome
FLCN 296.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:16,935,084 – 16,945,897
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 297 bp overlap
BRD4 2 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 169 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 129 bp overlap
CTCF 31 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 343 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 220 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 260 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 217 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 237 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 250 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 240 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 230 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 232 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 211 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 129 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 188 bp overlap
ChIP endodermal cell ENCFF471YCZ 311 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 186 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 219 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 246 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 157 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 212 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 208 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 246 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 242 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 196 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 208 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 238 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 319 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 303 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 192 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 274 bp overlap
ChIP BLaER1 ENCFF364PUR 118 bp overlap
ChIP BLaER1 ENCFF460KDD 407 bp overlap
EHF 1 dataset
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF432UGA 365 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 159 bp overlap
ELF3 1 dataset
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 301 bp overlap
ESR1 6 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 265 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 299 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 180 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 293 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 224 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 347 bp overlap
ESRRA 1 dataset
Motif DE_24h DE_24h-ESRRA_MA0592.4 9 bp overlap
ETV6 1 dataset
Motif DE_24h DE_24h-ETV6_MA0645.2 9 bp overlap
Elf5 1 dataset
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
FOXH1 4 datasets
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
Motif DE_24h DE_24h-FOXH1_MA0479.2 8 bp overlap
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 307 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 373 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 183 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 288 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 446 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 681 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 134 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 419 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 150 bp overlap
HOXA5 1 dataset
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD10 1 dataset
Motif DE_24h DE_24h-HOXD10_MA1506.2 10 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 364 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 391 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 335 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 531 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 187 bp overlap
KLF11 1 dataset
Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap
KLF14 1 dataset
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF9 3 datasets
ChIP HEK293 ENCFF588INF 177 bp overlap
ChIP HEK293 ENCFF588INF 381 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 157 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 235 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 166 bp overlap
NR1D2 1 dataset
Motif DE_24h DE_24h-NR1D2_MA1532.2 15 bp overlap
Nr5A2 1 dataset
Motif DE_24h DE_24h-Nr5A2_MA0505.3 9 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 325 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 813 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 788 bp overlap
PRDM9 4 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
RAD21 15 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 104 bp overlap
ChIP H1 ENCFF698EWO 71 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 153 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 199 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 195 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 255 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 342 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 252 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 256 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 245 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 216 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 249 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 165 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 222 bp overlap
SMAD2 8 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 350 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 347 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 813 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 504 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 515 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 772 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 813 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 813 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 813 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 813 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 351 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE36578.SMAD3.BG03 103 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 315 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 360 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 272 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 344 bp overlap
SMAD4 2 datasets
ChIP endoderm GSE29422.SMAD4.endoderm 318 bp overlap
ChIP hESC GSE29422.SMAD4.hESC 281 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 425 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 308 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 220 bp overlap
SP3 1 dataset
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP8 1 dataset
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 152 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 276 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 250 bp overlap
TFAP2A 1 dataset
Motif DE_24h DE_24h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_24h DE_24h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_24h DE_24h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_24h DE_24h-TFAP2E_MA1569.2 9 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 126 bp overlap
VEZF1 4 datasets
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Motif DE_24h DE_24h-VEZF1_MA1578.2 6 bp overlap
Motif DE_36h DE_36h-VEZF1_MA1578.2 6 bp overlap
Motif DE_60h DE_60h-VEZF1_MA1578.2 6 bp overlap
Wt1 1 dataset
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 94 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 143 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 449 bp overlap
ZBTB6 2 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_24h DE_24h-ZBTB6_MA1581.2 9 bp overlap
ZIC1 4 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 333 bp overlap
ZIC5 4 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZNF148 5 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
ZNF175 1 dataset
Motif DE_24h DE_24h-ZNF175_MA2332.1 9 bp overlap
ZNF184 1 dataset
Motif DE_24h DE_24h-ZNF184_MA2120.1 13 bp overlap
ZNF281 5 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ZNF354C 5 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_24h DE_24h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_24h DE_24h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF449 1 dataset
Motif DE_24h DE_24h-ZNF449_MA1656.2 10 bp overlap
ZNF460 1 dataset
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 257 bp overlap
ZNF770 1 dataset
Motif DE_24h DE_24h-ZNF770_MA2099.1 8 bp overlap
Zfp809 1 dataset
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Zic1::Zic2 4 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 4 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 4 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
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