chr16 : 6,558,150 6,558,425
275 bp 81 TFs 0 linked genes
This 275 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:6,553,150 – 6,563,425
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 275 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 275 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
BCOR 3 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 207 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 202 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 271 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 102 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 275 bp overlap
ChIP H1 ENCFF998XEK 241 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 275 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 207 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 214 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 192 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 275 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 211 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 270 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 152 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 275 bp overlap
ChIP DE DE-FOXA2-2 275 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 237 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 275 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 275 bp overlap
ChIP DE DE-GATA6-2 275 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 212 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 270 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 273 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 265 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 76 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 275 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 161 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 275 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 192 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 275 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 241 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 165 bp overlap
ChIP H1 ENCFF747ZPQ 227 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 275 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 275 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 266 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 275 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 275 bp overlap
ChIP hESC GSE20650.NANOG.hESC 275 bp overlap
ChIP hESC GSE18292.NANOG.hESC 132 bp overlap
NHLH2 1 dataset
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Nanog 1 dataset
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 275 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 8 datasets
ChIP BG03 GSE21614.POU5F1.BG03 236 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 275 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 275 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 275 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 257 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 275 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 275 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 173 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PROX1 1 dataset
Motif DE_12h DE_12h-PROX1_MA0794.1 12 bp overlap
Pgr 1 dataset
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 156 bp overlap
REST 1 dataset
ChIP neural cell ENCFF882LXX 275 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 275 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 260 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 175 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 240 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 275 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 275 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 275 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 275 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 228 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 255 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 242 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 181 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 241 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 185 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 140 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 271 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 275 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 275 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 256 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 140 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 270 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 275 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 262 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 275 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 275 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 275 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 272 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 229 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 275 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 263 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 189 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 186 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 275 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 269 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 262 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 196 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 207 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 263 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 234 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 234 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap