chr13 : 99,565,460 99,566,025
565 bp 61 TFs 0 linked genes
This 565 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:99,560,460 – 99,571,025
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 192 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 179 bp overlap
ChIP HepG2 ENCFF773YDL 565 bp overlap
BRD2 2 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 278 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 208 bp overlap
BRD3 3 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 202 bp overlap
ChIP MV4-11_IBET151_5000nM GSE120715.BRD3.MV4-11_IBET151_5000nM 136 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 282 bp overlap
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 200 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 247 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD4.MV4-11_IBET151_500nM 102 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 219 bp overlap
CTCF 20 datasets
ChIP GM23338 ENCFF531QOI 347 bp overlap
ChIP GM23338 ENCFF772DML 188 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 224 bp overlap
ChIP H9 ENCFF152GTF 313 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 289 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 565 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 364 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 127 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 242 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 166 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 219 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 118 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 168 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 151 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 167 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 144 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 179 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 216 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 222 bp overlap
ChIP BLaER1 ENCFF896HSY 132 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 179 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 320 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 144 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 384 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 263 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 289 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 125 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 160 bp overlap
FLI1 2 datasets
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 314 bp overlap
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 195 bp overlap
FOSL2 2 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 156 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 116 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 109 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 308 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 252 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 233 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 337 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 410 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 341 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 369 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 514 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 429 bp overlap
JUND 3 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 180 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 119 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 173 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 58 bp overlap
MCRS1 1 dataset
ChIP Huh-7 GSE97411.MCRS1.Huh-7 227 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 239 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 193 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 116 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 266 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 565 bp overlap
NOTCH3 2 datasets
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 179 bp overlap
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 246 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 222 bp overlap
POLR2A 12 datasets
ChIP GM12878 ENCFF412KAE 563 bp overlap
ChIP GM12878 ENCFF521FXC 233 bp overlap
ChIP GM12892 ENCFF542ZFO 452 bp overlap
ChIP GM15510 ENCFF880HVJ 437 bp overlap
ChIP GM15510 ENCFF880HVJ 279 bp overlap
ChIP GM18505 ENCFF311CYB 384 bp overlap
ChIP GM19193 ENCFF599VTO 323 bp overlap
ChIP H1 ENCFF566JSR 432 bp overlap
ChIP H1 ENCFF833NJP 294 bp overlap
ChIP HL-60 ENCFF321XKE 341 bp overlap
ChIP spleen ENCFF446ZGT 429 bp overlap
ChIP spleen ENCFF706IUS 280 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 265 bp overlap
ChIP K562 ENCFF648YPL 266 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 564 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 357 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 148 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 161 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 157 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF292RVQ 344 bp overlap
ChIP HepG2 ENCFF561IAJ 249 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 535 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 335 bp overlap
REST 1 dataset
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 201 bp overlap
SIN3A 2 datasets
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 162 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 210 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 565 bp overlap
SMARCA4 2 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 221 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 164 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 313 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 269 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 283 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 205 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 373 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 194 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 420 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 264 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 191 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 72 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 207 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 220 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap