chr13 : 50,390,591 – 50,391,130
539 bp 54 TFs 1 linked gene
This 539 bp open chromatin element is linked to ENSG00000286191 and is bound by 54 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000286191 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:50,385,591 – 50,396,130
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
ARID1B 3 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 339 bp overlap
ChIP K562 ENCFF938UXQ 164 bp overlap
ChIP K562 ENCFF938UXQ 485 bp overlap
BRD4 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 190 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 229 bp overlap
ChIP K562 ENCFF963TXY 320 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 276 bp overlap
ChIP K562 ENCFF673OEZ 228 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 158 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 302 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 220 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 261 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 369 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 259 bp overlap
CTCF 2 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 248 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 281 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 153 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 272 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 125 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 244 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 539 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 201 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 508 bp overlap
ChIP DE DE-FOXA2-2 383 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 198 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 158 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 151 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 225 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 184 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 207 bp overlap
GATA2 3 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 139 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 120 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 495 bp overlap
ChIP DE DE-GATA4-2 539 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 259 bp overlap
GATA6 10 datasets
ChIP AGS GSE51705.GATA6.AGS 164 bp overlap
ChIP DE DE-GATA6-1 476 bp overlap
ChIP DE DE-GATA6-2 539 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 287 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 413 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 342 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 213 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 539 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 383 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 275 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 347 bp overlap
HNF4A 4 datasets
ChIP liver ENCFF354NRH 252 bp overlap
ChIP liver ENCFF449HPV 270 bp overlap
ChIP liver ENCFF449HPV 69 bp overlap
ChIP liver ERP002306.HNF4A.liver 104 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 184 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 121 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 248 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 304 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 141 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 262 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 290 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 234 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 183 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 256 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 358 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 222 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 400 bp overlap
ChIP K562 ENCFF221HJH 388 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 208 bp overlap
ONECUT1 2 datasets
ChIP liver ERP002306.ONECUT1.liver 65 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 140 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 300 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 321 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 248 bp overlap
RELA 2 datasets
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 106 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 167 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 303 bp overlap
RXRA 5 datasets
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 196 bp overlap
ChIP HepG2 ENCFF204YVO 277 bp overlap
ChIP HepG2 ENCFF763IEA 127 bp overlap
ChIP liver ENCFF077DAP 256 bp overlap
ChIP liver ENCFF807CIA 302 bp overlap
RXRB 1 dataset
ChIP HepG2 ENCFF539ZAY 151 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 329 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 221 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 422 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 395 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 461 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 278 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 325 bp overlap
ChIP liver ENCFF769YSM 359 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap
TAL1 10 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 262 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 261 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 211 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 259 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 186 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 202 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 249 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 189 bp overlap
ChIP K562 ENCFF620GMX 170 bp overlap
ChIP K562 ENCFF661CCK 275 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 252 bp overlap
ChIP K562 ENCFF931DJY 287 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 381 bp overlap
ChIP K562 ENCFF319QZT 310 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 258 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 279 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 242 bp overlap
ChIP K562 ENCFF795CMH 331 bp overlap
ChIP K562 ENCFF975RXS 352 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 324 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 159 bp overlap
ZNF510 1 dataset
ChIP HEK293 ENCFF202BSY 345 bp overlap
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