chr13 : 44,078,845 44,079,278
433 bp 56 TFs 3 linked genes
This 433 bp open chromatin element is linked to CCDC122, ENOX1, and TSC22D1 and is bound by 56 transcription factors.
Linked Genes
3 genes
Link type
Gene Expression Dist. to TSS Distance Link type
CCDC122 199.4 kb Distal Multiome
ENOX1 292.2 kb Distal Multiome
TSC22D1 358.1 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:44,073,845 – 44,084,278
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 433 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 433 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 326 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 202 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 136 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 113 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 265 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 357 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 300 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 401 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 248 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 155 bp overlap
CTCF 2 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 381 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 237 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 397 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 182 bp overlap
ChIP hESC GSE17917.EP300.hESC 304 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 433 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 388 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 376 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 380 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 152 bp overlap
ChIP DE DE-FOXA2-1 433 bp overlap
ChIP DE DE-FOXA2-2 433 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 433 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 372 bp overlap
GATA1 4 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 124 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 182 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 388 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 375 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 389 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 272 bp overlap
ChIP DE DE-GATA4-1 433 bp overlap
ChIP DE DE-GATA4-2 433 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 298 bp overlap
ChIP foregut GSE117136.GATA4.foregut 315 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 363 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 433 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 380 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 119 bp overlap
ChIP DE DE-GATA6-1 433 bp overlap
ChIP DE DE-GATA6-2 433 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 433 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 433 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 433 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 433 bp overlap
ChIP H9 ERP004206.GATA6.H9 195 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 433 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 433 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 175 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 433 bp overlap
ChIP foregut GSE117136.GATA6.foregut 353 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 418 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 271 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 390 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 433 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 259 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 411 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 419 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 433 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 307 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 346 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 386 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 433 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 414 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 311 bp overlap
NANOG 12 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 300 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 433 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 433 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 328 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 433 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 433 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 433 bp overlap
ChIP hESC GSE20650.NANOG.hESC 335 bp overlap
ChIP hESC GSE18292.NANOG.hESC 111 bp overlap
ChIP hESC GSE18292.NANOG.hESC 108 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 367 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 243 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 406 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 419 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 385 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 149 bp overlap
POU5F1 18 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 360 bp overlap
ChIP GM23338 ENCFF333SNB 287 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 433 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 433 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 433 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 333 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 232 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 222 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 191 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 322 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 358 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 241 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 433 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 433 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 294 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 165 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 261 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 367 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 160 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 433 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 433 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 363 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 374 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 354 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 180 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 321 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 433 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 433 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 433 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 408 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 433 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 388 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 347 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 433 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 265 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMARCA4 5 datasets
ChIP NSC GSE125033.SMARCA4.NSC 286 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 433 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 289 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 433 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 433 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 433 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 433 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 266 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 433 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 433 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 433 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 424 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 433 bp overlap
SOX2 8 datasets
ChIP H9 GSE46837.SOX2.H9 277 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 433 bp overlap
ChIP OSK GSE81899.SOX2.OSK 288 bp overlap
ChIP hESC GSE69479.SOX2.hESC 283 bp overlap
ChIP hESC GSE18292.SOX2.hESC 117 bp overlap
ChIP hESC GSE18292.SOX2.hESC 100 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 433 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 393 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 302 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 310 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 298 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 239 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 146 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 372 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 287 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 170 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 250 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 314 bp overlap