chr13 : 24,506,412 – 24,507,244

832 bp 80 TFs 1 linked gene

This 832 bp open chromatin element is linked to PARP4 and is bound by 80 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
PARP4		5.5 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

80 transcription factors

AGO1 5 datasets

ChIP K-562 GSE120104.AGO1.K-562 513 bp overlap

ChIP K-562 ENCSR641BSL.AGO1.K-562 513 bp overlap

ChIP K562 ENCFF025NLP 507 bp overlap

ChIP K562 ENCFF025NLP 292 bp overlap

ChIP K562 ENCFF741BCI 202 bp overlap

AGO2 2 datasets

ChIP HepG2 ENCFF252VFI 532 bp overlap

ChIP HepG2 ENCFF773YDL 507 bp overlap

ARID1A 1 dataset

ChIP H9 GSE139260.ARID1A.H9 288 bp overlap

Ahr::Arnt 1 dataset

Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap

BRD4 3 datasets

ChIP COLO-741 GSE73319.BRD4.COLO-741 253 bp overlap

ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 54 bp overlap

ChIP hESC GSE33281.BRD4.hESC 175 bp overlap

ELF1 1 dataset

ChIP ME-1 GSE46044.ELF1.ME-1 280 bp overlap

ELF2 1 dataset

Motif ES_0h ES_0h-ELF2_MA1483.3 10 bp overlap

ELK1 1 dataset

Motif ES_0h ES_0h-ELK1_MA0028.3 9 bp overlap

ELK3 1 dataset

Motif ES_0h ES_0h-ELK3_MA0759.3 9 bp overlap

ERF 1 dataset

Motif ES_0h ES_0h-ERF_MA0760.2 9 bp overlap

ERF::FOXI1 1 dataset

Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap

ERG 3 datasets

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 510 bp overlap

ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap

ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 213 bp overlap

ESR1 2 datasets

ChIP Ishikawa GSE99905.ESR1.Ishikawa 447 bp overlap

ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 254 bp overlap

ETV3 1 dataset

Motif ES_0h ES_0h-ETV3_MA0763.2 9 bp overlap

ETV4 1 dataset

Motif ES_0h ES_0h-ETV4_MA0764.4 9 bp overlap

ETV5 1 dataset

Motif ES_0h ES_0h-ETV5_MA0765.4 9 bp overlap

FEV 1 dataset

Motif ES_0h ES_0h-FEV_MA0156.4 9 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 204 bp overlap

FOXA2 3 datasets

ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 308 bp overlap

ChIP DE DE-FOXA2-1 309 bp overlap

ChIP DE DE-FOXA2-2 333 bp overlap

FOXJ2::ELF1 1 dataset

Motif ES_0h ES_0h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXO1::ELK3 1 dataset

Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap

Gli1 1 dataset

Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 320 bp overlap

JUN 1 dataset

ChIP DE_D1 S40-DE-d1-JUN-exp2 411 bp overlap

KDM5B 1 dataset

ChIP K562 ENCFF049WWX 54 bp overlap

KLF1 1 dataset

Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap

KLF10 1 dataset

Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap

KLF11 1 dataset

Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap

KLF12 1 dataset

Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap

KLF14 1 dataset

Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap

KLF2 1 dataset

Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap

KLF3 1 dataset

Motif ES_0h ES_0h-KLF3_MA1516.2 10 bp overlap

KLF6 1 dataset

Motif ES_0h ES_0h-KLF6_MA1517.2 9 bp overlap

KLF7 1 dataset

Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap

KMT2A 1 dataset

ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 88 bp overlap

MAF1 1 dataset

ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 163 bp overlap

MTA1 1 dataset

ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 77 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 183 bp overlap

NCAPH2 1 dataset

ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 224 bp overlap

NFATC3 1 dataset

ChIP K562 ENCFF078EKB 372 bp overlap

NFYA 2 datasets

ChIP K-562 GSE26439.NFYA.K-562 265 bp overlap

ChIP K562 ENCFF732HOX 277 bp overlap

NFYB 6 datasets

ChIP GM12878 ENCFF474DNH 269 bp overlap

ChIP GM12878 ENCFF474DNH 381 bp overlap

ChIP K-562 GSE26439.NFYB.K-562 253 bp overlap

ChIP K-562 ENCSR000EGQ.NFYB.K-562 223 bp overlap

ChIP K562 ENCFF709RXX 107 bp overlap

ChIP WTC11 ENCFF751ZTQ 278 bp overlap

NR2C2 1 dataset

ChIP K562 ENCFF750AXF 227 bp overlap

NR2F2 2 datasets

ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 439 bp overlap

ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 439 bp overlap

OGG1 3 datasets

ChIP HEK293 GSE89017.OGG1.HEK293 380 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 300 bp overlap

ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 329 bp overlap

OLIG2 1 dataset

ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 238 bp overlap

PATZ1 1 dataset

Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap

PKNOX1 1 dataset

ChIP K562 ENCFF236IUS 204 bp overlap

POLR2A 2 datasets

ChIP K562 ENCFF262YXJ 233 bp overlap

ChIP spleen ENCFF446ZGT 69 bp overlap

POLR2G 3 datasets

ChIP HepG2 ENCFF508UTS 242 bp overlap

ChIP K562 ENCFF047BLG 497 bp overlap

ChIP K562 ENCFF648YPL 491 bp overlap

POU5F1 1 dataset

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 422 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 689 bp overlap

Plagl1 1 dataset

Motif ES_0h ES_0h-Plagl1_MA1615.2 8 bp overlap

RBFOX2 4 datasets

ChIP HepG2 ENCFF554DMZ 556 bp overlap

ChIP HepG2 ENCFF939HTZ 502 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 236 bp overlap

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 236 bp overlap

RBM22 2 datasets

ChIP K-562 GSE120104.RBM22.K-562 291 bp overlap

ChIP K-562 ENCSR848AOP.RBM22.K-562 204 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 561 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 560 bp overlap

RXR 1 dataset

ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 435 bp overlap

SIRT6 1 dataset

ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 99 bp overlap

SMAD2-3 1 dataset

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 174 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 363 bp overlap

SP3 1 dataset

Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap

SP4 1 dataset

Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap

SP8 1 dataset

Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap

SP9 1 dataset

Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap

SPDEF 1 dataset

Motif ES_0h ES_0h-SPDEF_MA0686.2 10 bp overlap

SREBP2 2 datasets

ChIP HCC70 GSE126380.SREBP2.HCC70 523 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 540 bp overlap

SSRP1 1 dataset

ChIP HT-1080_AclacinomycinA GSE107595.SSRP1.HT-1080_AclacinomycinA 348 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 393 bp overlap

TAL1 1 dataset

ChIP ME-1 GSE46044.TAL1.ME-1 261 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 437 bp overlap

Tfcp2l1 1 dataset

Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap

WDR5 1 dataset

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 493 bp overlap

ZBED4 1 dataset

Motif ES_0h ES_0h-ZBED4_MA2328.1 10 bp overlap

ZBTB14 1 dataset

Motif ES_0h ES_0h-ZBTB14_MA1650.2 8 bp overlap

ZBTB33 1 dataset

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 561 bp overlap

ZNF449 1 dataset

Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap

ZNF891 1 dataset

ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 77 bp overlap

Zbtb2 1 dataset

Motif ES_0h ES_0h-Zbtb2_MA2340.1 10 bp overlap