chr12 : 130,514,132 130,514,609
477 bp 63 TFs 1 linked gene
This 477 bp open chromatin element is linked to RIMBP2 and is bound by 63 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RIMBP2 119.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:130,509,132 – 130,519,609
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 74 bp overlap
ASCL1 2 datasets
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 191 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 128 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 445 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 396 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 477 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 431 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 80 bp overlap
BRD4 3 datasets
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 221 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 362 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFB 1 dataset
ChIP WTC11 ENCFF113HIY 477 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 292 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 400 bp overlap
CTCF 18 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 116 bp overlap
ChIP H1 ENCFF230QSV 128 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 252 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 134 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 187 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 257 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 161 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 219 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 133 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 121 bp overlap
ChIP islet ERP004003.CTCF.islet 272 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 477 bp overlap
ChIP neural cell ENCFF335ADI 353 bp overlap
ChIP neural progenitor cell ENCFF581WPG 477 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 136 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 51 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 146 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000AUQ.EP300.WA01 142 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 198 bp overlap
ESR1 3 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 117 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 384 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 198 bp overlap
EZH2 2 datasets
ChIP THP-1 GSE135024.EZH2.THP-1 367 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 227 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 345 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 304 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 429 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 336 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 297 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 154 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 392 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 322 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 204 bp overlap
JUN 6 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 283 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 308 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 453 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 423 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 444 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 307 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 477 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 60 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 212 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 476 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 224 bp overlap
ChIP hESC GSE18292.NANOG.hESC 97 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 94 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 202 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 364 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 133 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 434 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 167 bp overlap
ChIP H1 ENCFF967OJF 149 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 315 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 152 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 148 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 120 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 281 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 477 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 245 bp overlap
ChIP neural ENCSR000BTV.REST.neural 150 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 236 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 476 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 181 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 197 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 265 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 362 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 471 bp overlap
SMAD2_3 2 datasets
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 279 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 326 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 233 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 86 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 174 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 450 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 296 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 171 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 323 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 220 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 384 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 198 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 326 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 477 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 314 bp overlap
ChIP WTC11 ENCFF688PEU 477 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBP 1 dataset
ChIP hESC_10h GSE122298.TBP.hESC_10h 124 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 172 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 229 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 133 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 411 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 311 bp overlap
TFDP1 1 dataset
ChIP U266B1 GSE80661.TFDP1.U266B1 89 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 176 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 261 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 356 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 223 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 280 bp overlap