Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

AR 3 datasets

ChIP LNCaP GSE80256.AR.LNCaP 92 bp overlap

ChIP MCF-7 GSE48930.AR.MCF-7 193 bp overlap

ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 247 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 133 bp overlap

BRD3 3 datasets

ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 116 bp overlap

ChIP U-87MG_GBM_dBET6_1d GSE99171.BRD3.U-87MG_GBM_dBET6_1d 137 bp overlap

ChIP U-87MG_GBM_dBET6_2h GSE99171.BRD3.U-87MG_GBM_dBET6_2h 112 bp overlap

BRD4 4 datasets

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 264 bp overlap

ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 184 bp overlap

ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 189 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 169 bp overlap

CDK8 1 dataset

ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 56 bp overlap

CEBPA 1 dataset

ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 124 bp overlap

CLOCK 1 dataset

ChIP U2OS GSE44236.CLOCK.U2OS 60 bp overlap

CRX 1 dataset

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 334 bp overlap

CTCF 3 datasets

ChIP GSC23 GSE139416.CTCF.GSC23 87 bp overlap

ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 84 bp overlap

ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 273 bp overlap

E2F1 1 dataset

ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 118 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 151 bp overlap

EP300 2 datasets

ChIP neural ENCSR843ZUP.EP300.neural 299 bp overlap

ChIP sigmoid colon ENCFF953ZIP 174 bp overlap

ESR1 4 datasets

ChIP T-47D GSE148277.ESR1.T-47D 52 bp overlap

ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 123 bp overlap

ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 110 bp overlap

ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 87 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 401 bp overlap

ChIP DE DE-FOXA2-2 372 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 455 bp overlap

ChIP DE DE-GATA4-2 465 bp overlap

ChIP foregut GSE117136.GATA4.foregut 461 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 383 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 304 bp overlap

GATA6 13 datasets

ChIP DE DE-GATA6-1 465 bp overlap

ChIP DE DE-GATA6-2 465 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 265 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 409 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 288 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 465 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 423 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 316 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 465 bp overlap

ChIP foregut GSE117136.GATA6.foregut 465 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 406 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 308 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 288 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 126 bp overlap

ID3 1 dataset

ChIP K-562 ENCSR005NMT.ID3.K-562 465 bp overlap

JUN 1 dataset

ChIP 786-O GSE86092.JUN.786-O 121 bp overlap

MAX 1 dataset

ChIP SK-N-SH ENCFF285LXR 183 bp overlap

MED1 2 datasets

ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 234 bp overlap

ChIP U-87MG GSE36354.MED1.U-87MG 72 bp overlap

MED12 2 datasets

ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 68 bp overlap

ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 85 bp overlap

MXI1 1 dataset

ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 129 bp overlap

MYCN 2 datasets

ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 107 bp overlap

ChIP SH-EP_MYCNER_minOHT GSE111905.MYCN.SH-EP_MYCNER_minOHT 53 bp overlap

MYOD1 1 dataset

ChIP RD GSE137168.MYOD1.RD 162 bp overlap

NEUROG2 1 dataset

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 106 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHF.NR3C1.A-549 99 bp overlap

NRF1 1 dataset

ChIP K-562 ENCSR837EYC.NRF1.K-562 79 bp overlap

POLR2A 9 datasets

ChIP adrenal gland ENCFF843OBJ 352 bp overlap

ChIP esophagus muscularis mucosa ENCFF759BBR 146 bp overlap

ChIP gastrocnemius medialis ENCFF081DTE 70 bp overlap

ChIP gastrocnemius medialis ENCFF145VIB 108 bp overlap

ChIP neural cell ENCFF604SPB 352 bp overlap

ChIP sigmoid colon ENCFF725QFT 141 bp overlap

ChIP sigmoid colon ENCFF748YVT 251 bp overlap

ChIP sigmoid colon ENCFF754JQR 119 bp overlap

ChIP stomach ENCFF278MYS 215 bp overlap

SIN3A 1 dataset

ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 110 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 207 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 465 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 308 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 464 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 450 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 225 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 263 bp overlap

SMC1 1 dataset

ChIP HCAEC GSE101921.SMC1.HCAEC 345 bp overlap

SMC1A 1 dataset

ChIP MCF-7 GSE115602.SMC1A.MCF-7 220 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 403 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 465 bp overlap

STAT3 1 dataset

ChIP SUM159PT GSE152203.STAT3.SUM159PT 128 bp overlap

TCF12 1 dataset

ChIP SK-N-SH ENCFF147AHB 197 bp overlap

ZBTB33 2 datasets

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 334 bp overlap

ChIP K562 ENCFF875HLX 396 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 90 bp overlap

ZKSCAN1 4 datasets

ChIP HeLa-S3 ENCSR000ECJ.ZKSCAN1.HeLa-S3 164 bp overlap

ChIP Hep-G2 ENCSR157CAU.ZKSCAN1.Hep-G2 219 bp overlap

ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 302 bp overlap

ChIP K562 ENCFF977CBA 357 bp overlap

ZNF141 1 dataset

ChIP HEK293T GSE78099.ZNF141.HEK293T 93 bp overlap

Gene	Dist. to TSS	Distance	Link type
ARL6IP4	69.6 kb	Distal	Multiome
OGFOD2	75.0 kb	Distal	Multiome
ABCB9	83.3 kb	Distal	Multiome
PITPNM2	101.3 kb	Distal	Multiome
VPS37B	153.7 kb	Distal	Multiome
MPHOSPH9	183.3 kb	Distal	Multiome
MTRFR	183.6 kb	Distal	Multiome
HIP1R	214.3 kb	Distal	Multiome
CDK2AP1	222.5 kb	Distal	Multiome
DENR	297.0 kb	Distal	Multiome

Genome Browser