chr12 : 76,035,101 – 76,035,466
365 bp 54 TFs 3 linked genes
This 365 bp open chromatin element is linked to PHLDA1-DT, PHLDA1, and PHLDA1-AS1 and is bound by 54 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PHLDA1-DT 2.4 kb Proximal Proximity
PHLDA1 3.5 kb Proximal Proximity
PHLDA1-AS1 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:76,030,101 – 76,040,466
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 365 bp overlap
ChIP HepG2 ENCFF252VFI 175 bp overlap
ChIP HepG2 ENCFF773YDL 365 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 209 bp overlap
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 310 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 151 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF980NSF 251 bp overlap
ATF2 7 datasets
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 274 bp overlap
ChIP HEK293 ENCFF194VKZ 119 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 283 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 338 bp overlap
ChIP HepG2 ENCFF955VER 326 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 365 bp overlap
ChIP K562 ENCFF139ZZG 359 bp overlap
ATF3 6 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 166 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 121 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 365 bp overlap
ChIP K-562 ENCSR632DCH.ATF3.K-562 321 bp overlap
ChIP K562 ENCFF604FPV 365 bp overlap
ChIP K562 ENCFF921JQW 365 bp overlap
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 336 bp overlap
ChIP K562 ENCFF674KTF 280 bp overlap
ATF7 9 datasets
ChIP GM12878 ENCFF037PYH 365 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 329 bp overlap
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 328 bp overlap
ChIP HepG2 ENCFF470FKK 206 bp overlap
ChIP K-562 ENCSR972ZBV.ATF7.K-562 365 bp overlap
ChIP K562 ENCFF308SKS 247 bp overlap
ChIP K562 ENCFF308SKS 188 bp overlap
ChIP MCF-7 ENCFF578WKB 175 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 273 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 352 bp overlap
BRD4 4 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 313 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 248 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 238 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 108 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 295 bp overlap
CEBPB 2 datasets
ChIP IMR-90 ENCFF468UGY 251 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 137 bp overlap
CEBPG 2 datasets
ChIP K-562 ENCSR620VIC.CEBPG.K-562 246 bp overlap
ChIP K562 ENCFF783ADE 365 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF093OYK 246 bp overlap
ChIP BLaER1 ENCFF274GAT 254 bp overlap
ChIP BLaER1 ENCFF364PUR 290 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 263 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 216 bp overlap
ESR1 2 datasets
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 295 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 189 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 127 bp overlap
GATA4 1 dataset
ChIP A-549 GSE85002.GATA4.A-549 179 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF928TKZ 365 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 161 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 201 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 365 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 257 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 213 bp overlap
JUND 5 datasets
ChIP HCT116 ENCFF748ZQX 365 bp overlap
ChIP HepG2 ENCFF869OPW 271 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 149 bp overlap
ChIP K562 ENCFF336RCR 365 bp overlap
ChIP K562 ENCFF830LVJ 281 bp overlap
MED1 4 datasets
ChIP G296S GSE85628.MED1.G296S 352 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 352 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 365 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 230 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 294 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 351 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 152 bp overlap
NFIC 1 dataset
ChIP HepG2 ENCFF169TKU 365 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 337 bp overlap
NKX2-1 1 dataset
ChIP NCI-H2087 GSE39998.NKX2-1.NCI-H2087 141 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 321 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 270 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF239RSE 146 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 268 bp overlap
ChIP K562 ENCFF236IUS 365 bp overlap
POLR2A 5 datasets
ChIP HeLa-S3 ENCFF045HUU 365 bp overlap
ChIP PFSK-1 ENCFF576NIT 345 bp overlap
ChIP Panc1 ENCFF290KAB 214 bp overlap
ChIP SK-N-MC ENCFF088IVG 316 bp overlap
ChIP SK-N-SH ENCFF683PFH 268 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 365 bp overlap
ChIP HepG2 ENCFF508UTS 365 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 126 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 190 bp overlap
ChIP HepG2 ENCFF292RVQ 209 bp overlap
RPA2_phospho 3 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 365 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 273 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 282 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SIN3A 2 datasets
ChIP HCT116 ENCFF203YBB 113 bp overlap
ChIP HCT116 ENCFF203YBB 365 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 365 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 268 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 207 bp overlap
STAT1 4 datasets
ChIP FaDu_BB608 GSE78212.STAT1.FaDu_BB608 216 bp overlap
ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 365 bp overlap
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 348 bp overlap
ChIP K-562 ENCSR000EHJ.STAT1.K-562 141 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 364 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 192 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 365 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 296 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 283 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 205 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 209 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 199 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 292 bp overlap
ZC3H8 1 dataset
ChIP HCT-116 GSE47938.ZC3H8.HCT-116 310 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 148 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 365 bp overlap
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