chr12 : 74,293,517 – 74,293,995
478 bp 59 TFs 1 linked gene
This 478 bp open chromatin element is linked to LINC02882 and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC02882 573 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:74,288,517 – 74,298,995
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 137 bp overlap
BRD2 9 datasets
ChIP K-562 GSE140325.BRD2.K-562 167 bp overlap
ChIP K-562 GSE140325.BRD2.K-562 107 bp overlap
ChIP K-562 GSE140325.BRD2.K-562 60 bp overlap
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 478 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 360 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD2.K-562_IBET151_50nM 194 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD2.K-562_IBET151_50nM 141 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 364 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 204 bp overlap
BRD3 6 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 318 bp overlap
ChIP K-562_DMSO GSE120715.BRD3.K-562_DMSO 173 bp overlap
ChIP K-562_DMSO GSE120715.BRD3.K-562_DMSO 204 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 320 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD3.K-562_IBET151_50nM 160 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 225 bp overlap
BRD4 8 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 412 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 381 bp overlap
ChIP K-562_IBET151_50nM GSE120715.BRD4.K-562_IBET151_50nM 150 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 316 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 182 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 189 bp overlap
ChIP K562 ENCFF092PWQ 235 bp overlap
ChIP K562 ENCFF092PWQ 444 bp overlap
CHD1 1 dataset
ChIP K-562 ENCSR000AQD.CHD1.K-562 162 bp overlap
CTCF 1 dataset
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 302 bp overlap
E2F4 2 datasets
ChIP K-562 ENCSR000EWL.E2F4.K-562 157 bp overlap
ChIP K-562 ENCSR000EWL.E2F4.K-562 153 bp overlap
E2F6 6 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 478 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 273 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 126 bp overlap
ChIP K562 ENCFF136LTS 112 bp overlap
ChIP K562 ENCFF136LTS 212 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 216 bp overlap
ELF1 2 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 196 bp overlap
ChIP K562 ENCFF496AKI 277 bp overlap
EP400 2 datasets
ChIP K-562 ENCSR817QKV.EP400.K-562 288 bp overlap
ChIP K562 ENCFF850OZQ 324 bp overlap
ERF 1 dataset
ChIP K562 ENCFF626IQJ 337 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 114 bp overlap
ESR1 1 dataset
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 313 bp overlap
ESR1_Y537S 1 dataset
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 172 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 299 bp overlap
FOXP1 1 dataset
ChIP K562 ENCFF954SDY 396 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 133 bp overlap
GABPB1 1 dataset
ChIP K-562 ENCSR138YYY.GABPB1.K-562 403 bp overlap
GMEB1 2 datasets
ChIP K562 ENCFF705LHX 330 bp overlap
ChIP K562 ENCFF705LHX 127 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 153 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 153 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 193 bp overlap
HDAC1 2 datasets
ChIP K562 ENCFF872AQB 363 bp overlap
ChIP K562 ENCFF872AQB 131 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 341 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF934ZRG 123 bp overlap
KDM5B 3 datasets
ChIP K-562 ENCSR000AQA.KDM5B.K-562 287 bp overlap
ChIP K-562 ENCSR000AQA.KDM5B.K-562 125 bp overlap
ChIP K562 ENCFF049WWX 277 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 478 bp overlap
ChIP K562 ENCFF320EQC 375 bp overlap
MAX 4 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 293 bp overlap
ChIP K562 ENCFF110LJS 351 bp overlap
ChIP K562 ENCFF398VJM 276 bp overlap
ChIP K562 ENCFF524IJO 289 bp overlap
MAZ 1 dataset
ChIP K562 ENCFF982GSZ 441 bp overlap
MGA 3 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 456 bp overlap
ChIP K562 ENCFF140CEX 322 bp overlap
ChIP K562 ENCFF140CEX 110 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 199 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 226 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 111 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 214 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 452 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 50 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 113 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF689EWI 478 bp overlap
NSD2 1 dataset
ChIP K-562 ENCSR000AVE.NSD2.K-562 100 bp overlap
PHF8 1 dataset
ChIP K-562 ENCSR000AQH.PHF8.K-562 478 bp overlap
POLR2A 2 datasets
ChIP K562 ENCFF137JSF 442 bp overlap
ChIP K562 ENCFF262YXJ 301 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 361 bp overlap
ChIP K562 ENCFF648YPL 361 bp overlap
RBBP5 3 datasets
ChIP K-562 ENCSR000AQI.RBBP5.K-562 444 bp overlap
ChIP K562 ENCFF070CVK 478 bp overlap
ChIP K562 ENCFF070CVK 114 bp overlap
RBFOX2 4 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 478 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 474 bp overlap
ChIP K562 ENCFF196WTG 165 bp overlap
ChIP K562 ENCFF967GRF 174 bp overlap
REST 2 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 94 bp overlap
ChIP K562 ENCFF430APM 231 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 237 bp overlap
SAP30 2 datasets
ChIP K562 ENCFF652WJB 370 bp overlap
ChIP K562 ENCFF652WJB 106 bp overlap
SETDB1 1 dataset
ChIP K-562 ENCSR000EWI.SETDB1.K-562 78 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 324 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 318 bp overlap
TAF1 2 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 236 bp overlap
ChIP K562 ENCFF491WAE 103 bp overlap
TEAD4 2 datasets
ChIP K562 ENCFF673NIK 124 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 65 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 186 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BKU.YY1.K-562 118 bp overlap
ChIP K562 ENCFF660QRE 311 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 51 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 345 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 150 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 281 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 427 bp overlap
ChIP K562 ENCFF547OSS 444 bp overlap
ZNF740 2 datasets
ChIP K562 ENCFF913GVQ 326 bp overlap
ChIP K562 ENCFF913GVQ 122 bp overlap
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