chr12 : 71,804,372 – 71,804,833
461 bp 80 TFs 0 linked genes
This 461 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:71,799,372 – 71,809,833
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AR 5 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 206 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 108 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 199 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 110 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 70 bp overlap
ASCL1 4 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 288 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 151 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 135 bp overlap
CTCF 4 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 134 bp overlap
ChIP BLaER1 ENCFF364PUR 375 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
EOMES 2 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 2 datasets
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 262 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 139 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 116 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Ikzf3 3 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
KLF11 2 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF13 2 datasets
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF6 2 datasets
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
Motif ES_0h ES_0h-KLF6_MA1517.2 9 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MSANTD3 2 datasets
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
Motif ES_0h ES_0h-MSANTD3_MA1523.2 7 bp overlap
MTF1 1 dataset
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
MYOD1 2 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
NFYA 2 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap
NFYB 7 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 232 bp overlap
ChIP HepG2 ENCFF174VYX 319 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 201 bp overlap
ChIP K562 ENCFF709RXX 294 bp overlap
ChIP WTC11 ENCFF751ZTQ 326 bp overlap
NFYC 2 datasets
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 200 bp overlap
ChIP HepG2 ENCFF836FYP 312 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1538.1 15 bp overlap
NR2F6 1 dataset
Motif DE_12h DE_12h-NR2F6_MA1539.1 15 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nkx3-2 1 dataset
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
Nrf1 2 datasets
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
Motif ES_0h ES_0h-Nrf1_MA0506.3 12 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PBX1 2 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 189 bp overlap
ChIP A549 ENCFF475JCE 297 bp overlap
PBX2 2 datasets
ChIP Hep-G2 ENCSR849DFF.PBX2.Hep-G2 150 bp overlap
ChIP HepG2 ENCFF225AJT 308 bp overlap
PBX3 4 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
ChIP GM12878 ENCFF285BQQ 217 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 107 bp overlap
ChIP SK-N-SH ENCFF876BMC 257 bp overlap
PKNOX1 9 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCFF589FCY 308 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 231 bp overlap
ChIP HEK293T ENCFF174WDB 224 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 257 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 393 bp overlap
ChIP K562 ENCFF236IUS 370 bp overlap
ChIP MCF-7 ENCFF116OCS 255 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 289 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
SNAI1 2 datasets
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI2 2 datasets
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
Motif ES_0h ES_0h-SNAI2_MA0745.3 8 bp overlap
SNAI3 2 datasets
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 273 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 279 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 216 bp overlap
SP2 2 datasets
ChIP H1 ENCFF903ACN 309 bp overlap
ChIP WA01 ENCSR000BQG.SP2.WA01 145 bp overlap
SP3 2 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SP9 2 datasets
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX19 2 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif ES_0h ES_0h-TBX19_MA0804.2 17 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBXT 2 datasets
Motif DE_12h DE_12h-TBXT_MA0009.2 16 bp overlap
Motif ES_0h ES_0h-TBXT_MA0009.2 16 bp overlap
TCF12 2 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 339 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 220 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 381 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 199 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 285 bp overlap
ZSCAN21 2 datasets
Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap
Motif ES_0h ES_0h-ZSCAN21_MA2336.1 7 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Znf423 2 datasets
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
Motif ES_0h ES_0h-Znf423_MA0116.1 15 bp overlap
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