chr12 : 59,322,457 – 59,323,048
591 bp 61 TFs 1 linked gene
This 591 bp open chromatin element is linked to ENSG00000286279 and is bound by 61 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000286279 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:59,317,457 – 59,328,048
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP ERP001226.AR.LNCaP 130 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 117 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 247 bp overlap
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 528 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 118 bp overlap
ATF2 2 datasets
ChIP WA01 ENCSR000BQU.ATF2.WA01 346 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 59 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 240 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 126 bp overlap
BRD4 4 datasets
ChIP VCaP GSE148358.BRD4.VCaP 208 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 591 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 509 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 340 bp overlap
CDK9 1 dataset
ChIP A-375 GSE128080.CDK9.A-375 155 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 254 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 591 bp overlap
CHD8 2 datasets
ChIP T-47D GSE62428.CHD8.T-47D 162 bp overlap
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 281 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 155 bp overlap
CTCF 64 datasets
ChIP RH4 GSE83726.CTCF.RH4 150 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 251 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 143 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 211 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 282 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF041CKA 339 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF046GNG 375 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF087VBI 392 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF230SFD 471 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 138 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 382 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF255MAF 330 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 168 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF258PHG 390 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF265AZL 381 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 161 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 291 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 397 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF311KBD 344 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF311KBD 471 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 256 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 136 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 541 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 384 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 481 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF359BHR 476 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 352 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 380 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF394MUG 371 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 430 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 428 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 459 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 450 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 353 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 386 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 249 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 136 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 460 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 372 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF562MJV 387 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 386 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 491 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF604JAV 431 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF604JAV 367 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 358 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 408 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF641PIN 345 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF677SUG 344 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 377 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 478 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 360 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 451 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 133 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF749FBO 387 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 155 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 375 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF784LWO 357 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 248 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 424 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 439 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF851XUX 366 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF883PFA 358 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 439 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 494 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 148 bp overlap
EGR1 1 dataset
ChIP fibroblast_EtOH-24h GSE134924.EGR1.fibroblast_EtOH-24h 112 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 3 datasets
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 417 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.ESR1.primary-breast-cancer_B1_DSG 270 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 130 bp overlap
FOXA1 6 datasets
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 156 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 229 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 234 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 242 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 399 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 511 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 105 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 105 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 477 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 478 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 214 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 237 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 90 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 112 bp overlap
MAFK 2 datasets
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 51 bp overlap
ChIP HepG2 ENCFF743ZOF 83 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 591 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 440 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 292 bp overlap
NANOG 1 dataset
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 152 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 142 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 271 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 125 bp overlap
OLIG2 7 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 591 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 591 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 453 bp overlap
ChIP brain-prefrontal-cortex_2017025 GSE129039.OLIG2.brain-prefrontal-cortex_2017025 591 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 591 bp overlap
ChIP brain-prefrontal-cortex_201704 GSE129039.OLIG2.brain-prefrontal-cortex_201704 417 bp overlap
ChIP brain-prefrontal-cortex_2018001 GSE129039.OLIG2.brain-prefrontal-cortex_2018001 254 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 201 bp overlap
PGR 4 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 215 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 273 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 214 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 409 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 405 bp overlap
ChIP H1 ENCFF566JSR 591 bp overlap
ChIP H1 ENCFF770YBQ 424 bp overlap
ChIP H1 ENCFF833NJP 340 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 122 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 508 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 203 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 203 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 174 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 250 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 162 bp overlap
RELA 1 dataset
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 197 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 264 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 195 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 150 bp overlap
SMARCA4 3 datasets
ChIP NGP GSE134626.SMARCA4.NGP 425 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 425 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 207 bp overlap
SMC1A 1 dataset
ChIP MCF-7 GSE115602.SMC1A.MCF-7 140 bp overlap
SOX2 2 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 243 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 160 bp overlap
SOX8 3 datasets
ChIP RH4 GSE116344.SOX8.RH4 372 bp overlap
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 253 bp overlap
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 345 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
STAT2 1 dataset
ChIP THP-1 GSE128111.STAT2.THP-1 144 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 200 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 201 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 113 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 150 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 262 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 246 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 172 bp overlap
ZNF425 2 datasets
ChIP WTC11 ENCFF359IXT 301 bp overlap
ChIP WTC11 ENCFF359IXT 241 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
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