chr12 : 32,532,956 32,533,263
307 bp 85 TFs 0 linked genes
This 307 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:32,527,956 – 32,538,263
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP GSE80256.AR.LNCaP 307 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 161 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 60 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 269 bp overlap
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 135 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BCL6 4 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 307 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 221 bp overlap
ChIP OCI-Ly1_si GSE107920.BCL6.OCI-Ly1_si 186 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 260 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 127 bp overlap
BRD4 4 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 274 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 186 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 164 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 199 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 206 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 218 bp overlap
EGR1 2 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 98 bp overlap
ChIP HepG2 ENCFF674RQO 232 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 307 bp overlap
ESR1 77 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 279 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 232 bp overlap
ChIP Ishikawa GSE99905.ESR1.Ishikawa 240 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 236 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 307 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 307 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 307 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 307 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 307 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 225 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 307 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 236 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 307 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 307 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 307 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 307 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 307 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 307 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 307 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 307 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 307 bp overlap
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 285 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 307 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 307 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 307 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 307 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 307 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 307 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 307 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 307 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 275 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 236 bp overlap
ChIP MCF-7 GSE117492.ESR1.MCF-7 225 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 209 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 206 bp overlap
ChIP MCF-7 GSE136302.ESR1.MCF-7 188 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 172 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_clone14 186 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 229 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 238 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 284 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 234 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 225 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 209 bp overlap
ChIP MCF-7_E2 ERP000380.ESR1.MCF-7_E2 204 bp overlap
ChIP MCF-7_E2 GSE71276.ESR1.MCF-7_E2 203 bp overlap
ChIP MCF-7_E2 ERP000901.ESR1.MCF-7_E2 143 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 162 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 177 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 192 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 196 bp overlap
ChIP MCF-7_E2_10M GSE54855.ESR1.MCF-7_E2_10M 140 bp overlap
ChIP MCF-7_E2_40M GSE54855.ESR1.MCF-7_E2_40M 146 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 238 bp overlap
ChIP MCF-7_E2_45min GSE109820.ESR1.MCF-7_E2_45min 245 bp overlap
ChIP MCF-7_E2_90min GSE109820.ESR1.MCF-7_E2_90min 264 bp overlap
ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 167 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 158 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 205 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 208 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 160 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 212 bp overlap
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 128 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 166 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 160 bp overlap
ChIP MCF-7_estradiol-Dex_75min GSE99626.ESR1.MCF-7_estradiol-Dex_75min 120 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 181 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 173 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 172 bp overlap
ChIP MCF-7_shCtrl GSE125594.ESR1.MCF-7_shCtrl 198 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 145 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 167 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 197 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 207 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 226 bp overlap
ESR1_D538G 3 datasets
ChIP MCF-7_E2 GSE94493.ESR1_D538G.MCF-7_E2 135 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_D538G.MCF-7_dox 136 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_D538G.MCF-7_dox_E2 237 bp overlap
ESR1_Y537N 3 datasets
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 176 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 267 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 209 bp overlap
ESR1_Y537S 3 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 302 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 242 bp overlap
ChIP T-47D_dox GSE94493.ESR1_Y537S.T-47D_dox 199 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 190 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 164 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 307 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 147 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 211 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 302 bp overlap
ChIP DE DE-GATA4-2 307 bp overlap
GATA6 8 datasets
ChIP AGS GSE51936.GATA6.AGS 93 bp overlap
ChIP DE DE-GATA6-2 301 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 284 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 307 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 307 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 307 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 307 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 307 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 56 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 305 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 307 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 307 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 164 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MED1 7 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 307 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 277 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 254 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 239 bp overlap
ChIP VCaP GSE148358.MED1.VCaP 258 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 243 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 199 bp overlap
MEF2A 1 dataset
ChIP Hep-G2 ENCSR291MJH.MEF2A.Hep-G2 177 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 207 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 202 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 121 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 307 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 127 bp overlap
NCOR1 1 dataset
ChIP OCI-Ly1 GSE29282.NCOR1.OCI-Ly1 170 bp overlap
NCOR2 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.NCOR2.B-cell_GERMINAL_CENTER 188 bp overlap
ChIP OCI-Ly1 GSE29282.NCOR2.OCI-Ly1 277 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHE.NR3C1.A-549 134 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 158 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 233 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 152 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 307 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 128 bp overlap
RELA 1 dataset
ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 204 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 245 bp overlap
SFPQ 1 dataset
ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 151 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 162 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 291 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 307 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 307 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 196 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 220 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 114 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 264 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 286 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 278 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 135 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 181 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 272 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap