chr12 : 30,785,555 – 30,786,265
710 bp 96 TFs 0 linked genes
This 710 bp open chromatin element has no linked target genes and is bound by 96 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:30,780,555 – 30,791,265
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 442 bp overlap
BARX1 2 datasets
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
BRD4 1 dataset
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 220 bp overlap
BSX 2 datasets
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
DLX1 2 datasets
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
Dlx3 2 datasets
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
EGR1 1 dataset
Motif DE_24h DE_24h-EGR1_MA0162.5 10 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ETV5::DRGX 1 dataset
Motif DE_24h DE_24h-ETV5DRGX_MA1944.2 12 bp overlap
FOXA1 1 dataset
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
FOXA2 1 dataset
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GATA4 2 datasets
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 505 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 477 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 421 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 484 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 710 bp overlap
GBX2 2 datasets
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
GRHL1 1 dataset
Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap
HESX1 2 datasets
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
HLF 2 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
Motif DE_24h DE_24h-HLF_MA0043.4 9 bp overlap
HOXA7 2 datasets
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 656 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 674 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 673 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 628 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 655 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 555 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 704 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 710 bp overlap
KLF17 1 dataset
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
KLF4 2 datasets
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 210 bp overlap
LBX2 2 datasets
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
MSX1 2 datasets
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Mecom 3 datasets
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
Motif DE_24h DE_24h-Mecom_MA0029.2 11 bp overlap
Motif DE_24h DE_24h-Mecom_MA0029.2 11 bp overlap
Msx3 2 datasets
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
NANOG 5 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 143 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 710 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 535 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 373 bp overlap
ChIP hESC GSE18292.NANOG.hESC 160 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
NFIL3 4 datasets
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
Motif DE_24h DE_24h-NFIL3_MA0025.3 9 bp overlap
Motif DE_24h DE_24h-NFIL3_MA0025.3 9 bp overlap
Motif DE_24h DE_24h-NFIL3_MA0025.3 9 bp overlap
Nobox 2 datasets
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
Nr2e1 1 dataset
Motif DE_24h DE_24h-Nr2e1_MA0676.1 9 bp overlap
ONECUT3 1 dataset
Motif DE_24h DE_24h-ONECUT3_MA0757.2 12 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 194 bp overlap
PHOX2A 2 datasets
Motif DE_24h DE_24h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_24h DE_24h-PHOX2A_MA0713.1 11 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif DE_24h DE_24h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 3 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif DE_24h DE_24h-POU3F4_MA0789.1 9 bp overlap
POU4F1 2 datasets
Motif DE_24h DE_24h-POU4F1_MA0790.2 12 bp overlap
Motif DE_24h DE_24h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_24h DE_24h-POU4F2_MA0683.2 15 bp overlap
Motif DE_24h DE_24h-POU4F2_MA0683.2 15 bp overlap
POU4F3 2 datasets
Motif DE_24h DE_24h-POU4F3_MA0791.2 12 bp overlap
Motif DE_24h DE_24h-POU4F3_MA0791.2 12 bp overlap
POU5F1 16 datasets
ChIP BG03 GSE21614.POU5F1.BG03 166 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 710 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 710 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 362 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 493 bp overlap
ChIP OSvK GSE81899.POU5F1.OSvK 333 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 514 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 143 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 338 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 209 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 298 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_24h DE_24h-POU5F1B_MA0792.1 9 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 619 bp overlap
PROP1 1 dataset
Motif DE_24h DE_24h-PROP1_MA0715.1 11 bp overlap
Pax7 2 datasets
Motif DE_24h DE_24h-Pax7_MA0680.3 10 bp overlap
Motif DE_24h DE_24h-Pax7_MA0680.3 10 bp overlap
Pou5f1::Sox2 3 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_24h DE_24h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAX 2 datasets
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
RREB1 1 dataset
Motif DE_24h DE_24h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 268 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 442 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 451 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 523 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 710 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 573 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 549 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 695 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 458 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 453 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 565 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 248 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 267 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 211 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 312 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 710 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 710 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 423 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 674 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 382 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 703 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 710 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 230 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 421 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 68 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 158 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 303 bp overlap
TEAD4 1 dataset
ChIP ESC S26-ESC-d0-TEAD4-exp1 492 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 81 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_24h DE_24h-ZNF184_MA2120.1 13 bp overlap
ZNF354C 1 dataset
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
ZNF558 3 datasets
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Motif DE_24h DE_24h-ZNF558_MA2335.1 29 bp overlap
Motif DE_24h DE_24h-ZNF558_MA2335.1 29 bp overlap
ZNF740 1 dataset
Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap
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