chr11 : 117,551,878 117,552,889
1,011 bp 100 TFs 4 linked genes
This 1.0 kb open chromatin element is linked to 4 target genes and is bound by 100 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
CEP164 224.5 kb Distal Multiome
BACE1 236.1 kb Distal Multiome
DSCAML1 244.9 kb Distal Multiome
BACE1-AS 260.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:117,546,878 – 117,557,889
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
ASCL1 3 datasets
Motif DE_72h DE_72h-ASCL1_MA1100.3 8 bp overlap
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
Ascl2 1 dataset
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 124 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 311 bp overlap
CREB1 2 datasets
ChIP MCF-7 ENCFF867SAS 417 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 227 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 127 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 228 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 311 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 336 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 222 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 255 bp overlap
ChIP BLaER1 ENCFF274GAT 233 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
E2F6 2 datasets
Motif DE_72h DE_72h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 160 bp overlap
EHF 1 dataset
Motif DE_72h DE_72h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_72h DE_72h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 252 bp overlap
ESR1 17 datasets
ChIP MCF-7 ENCFF004AKH 353 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 196 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 285 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 164 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 192 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 185 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 178 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 247 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 279 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 176 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 360 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 148 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 250 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 203 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 286 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 558 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 192 bp overlap
ESRRA 1 dataset
Motif DE_72h DE_72h-ESRRA_MA0592.4 9 bp overlap
ETV7 1 dataset
Motif DE_72h DE_72h-ETV7_MA1708.2 9 bp overlap
EZH2 6 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 925 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 455 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 337 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 499 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 296 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 262 bp overlap
Esrrg 1 dataset
Motif DE_72h DE_72h-Esrrg_MA0643.2 9 bp overlap
FIGLA 2 datasets
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 680 bp overlap
ChIP DE DE-FOXA2-2 608 bp overlap
FOXP2 1 dataset
Motif DE_72h DE_72h-FOXP2_MA0593.2 9 bp overlap
GATA1 1 dataset
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA3 4 datasets
ChIP MCF-7 ENCFF352QVM 481 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 194 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 217 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 256 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 1011 bp overlap
ChIP DE DE-GATA4-2 1011 bp overlap
ChIP foregut GSE117136.GATA4.foregut 645 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 364 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 1011 bp overlap
ChIP DE DE-GATA6-2 1011 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1011 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 144 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 217 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 997 bp overlap
ChIP foregut GSE117136.GATA6.foregut 576 bp overlap
HES6 1 dataset
Motif DE_72h DE_72h-HES6_MA1493.1 10 bp overlap
Hmx2 1 dataset
Motif DE_72h DE_72h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_72h DE_72h-Hmx3_MA0898.2 9 bp overlap
ISL2 1 dataset
Motif DE_72h DE_72h-ISL2_MA0914.2 6 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 159 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 279 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MYF6 1 dataset
Motif DE_72h DE_72h-MYF6_MA0667.1 10 bp overlap
MYOD1 2 datasets
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
MZF1 1 dataset
Motif DE_72h DE_72h-MZF1_MA0056.3 8 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 214 bp overlap
NFIA 1 dataset
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
NHLH2 1 dataset
Motif DE_72h DE_72h-NHLH2_MA1529.2 16 bp overlap
NR2C1 1 dataset
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
NR5A1 1 dataset
Motif DE_72h DE_72h-NR5A1_MA1540.3 12 bp overlap
Nanog 1 dataset
Motif DE_72h DE_72h-Nanog_MA2339.1 7 bp overlap
Nkx3-2 1 dataset
Motif DE_72h DE_72h-Nkx3-2_MA0122.4 10 bp overlap
Nr1H2 1 dataset
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
Nr5A2 1 dataset
Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 154 bp overlap
Olig2 1 dataset
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
Pax7 1 dataset
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
Prdm4 1 dataset
Motif DE_72h DE_72h-Prdm4_MA1647.3 11 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
RARA 1 dataset
Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap
RELA 1 dataset
ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 195 bp overlap
RORA 1 dataset
Motif DE_72h DE_72h-RORA_MA0072.2 11 bp overlap
RORB 2 datasets
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 299 bp overlap
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 259 bp overlap
SCRT1 1 dataset
Motif DE_72h DE_72h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_72h DE_72h-SCRT2_MA0744.3 10 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 932 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 322 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 327 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 456 bp overlap
SNAI1 1 dataset
Motif DE_72h DE_72h-SNAI1_MA1558.2 7 bp overlap
SNAI2 2 datasets
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
SNAI3 2 datasets
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 408 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 1005 bp overlap
SP5 2 datasets
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SPIB 1 dataset
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 225 bp overlap
TCF12 1 dataset
Motif DE_72h DE_72h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
TFAP4 1 dataset
Motif DE_72h DE_72h-TFAP4_MA0691.1 10 bp overlap
THRA 1 dataset
Motif DE_72h DE_72h-THRA_MA1969.2 18 bp overlap
TP63 2 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 235 bp overlap
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap
Tcf12 1 dataset
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
ZEB1 2 datasets
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap
ZNF263 1 dataset
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ZNF324 1 dataset
Motif DE_72h DE_72h-ZNF324_MA1977.2 14 bp overlap
ZNF416 1 dataset
Motif DE_72h DE_72h-ZNF416_MA1979.2 10 bp overlap
ZNF460 1 dataset
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
ZNF768 1 dataset
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap