chr11 : 104,728,906 104,729,305
399 bp 87 TFs 0 linked genes
This 399 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:104,723,906 – 104,734,305
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
BARX1 1 dataset
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
CTCF 1 dataset
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
DLX1 1 dataset
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Dlx3 1 dataset
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
Dux 1 dataset
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 161 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 331 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 383 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 222 bp overlap
ESR1 2 datasets
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 226 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 210 bp overlap
FLI1 6 datasets
ChIP A-673 GSE99959.FLI1.A-673 216 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 399 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 399 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 399 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 399 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 399 bp overlap
FOXA1 1 dataset
Motif DE_36h DE_36h-FOXA1_MA0148.5 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 399 bp overlap
ChIP DE DE-FOXA2-2 375 bp overlap
Motif DE_36h DE_36h-FOXA2_MA0047.4 8 bp overlap
FOXB1 1 dataset
Motif DE_36h DE_36h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap
FOXG1 1 dataset
Motif DE_36h DE_36h-FOXG1_MA0613.1 8 bp overlap
FOXK1 1 dataset
Motif DE_36h DE_36h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_36h DE_36h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_36h DE_36h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_36h DE_36h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap
FOXP3 1 dataset
Motif DE_36h DE_36h-FOXP3_MA0850.1 7 bp overlap
FOXS1 1 dataset
Motif DE_36h DE_36h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_36h DE_36h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_36h DE_36h-Foxj2_MA0614.1 8 bp overlap
Foxl2 1 dataset
Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_36h DE_36h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_36h DE_36h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 378 bp overlap
ChIP DE DE-GATA4-2 399 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 350 bp overlap
ChIP DE DE-GATA6-2 399 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 269 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 399 bp overlap
GBX2 1 dataset
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
HLF 1 dataset
Motif DE_36h DE_36h-HLF_MA0043.4 9 bp overlap
HOXA7 1 dataset
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
ISL2 1 dataset
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
LBX2 1 dataset
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 399 bp overlap
MSX1 1 dataset
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
MXI1 1 dataset
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
Msx3 1 dataset
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 332 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 310 bp overlap
NFIC 3 datasets
ChIP Ishikawa ENCFF029AAD 315 bp overlap
ChIP Ishikawa ENCFF029AAD 109 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 247 bp overlap
Nkx3-2 1 dataset
Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap
Nobox 1 dataset
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 175 bp overlap
PBX2 1 dataset
Motif DE_36h DE_36h-PBX2_MA1113.3 9 bp overlap
PHOX2A 1 dataset
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 217 bp overlap
PPARG 1 dataset
Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap
PROP1 1 dataset
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Pax7 1 dataset
Motif DE_36h DE_36h-Pax7_MA0680.3 10 bp overlap
RAX 1 dataset
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_36h DE_36h-REL_MA0101.1 10 bp overlap
REST 1 dataset
ChIP PFSK-1 ENCFF845VHA 321 bp overlap
SMAD2 1 dataset
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 392 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 314 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 368 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 399 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 186 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 273 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 297 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 301 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 198 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0872.1 13 bp overlap
USF1 1 dataset
Motif DE_36h DE_36h-USF1_MA0093.4 10 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZNF274 1 dataset
Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap
ZNF282 1 dataset
Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap
ZNF558 1 dataset
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
ZNF701 1 dataset
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
ZNF816 1 dataset
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap