chr1 : 200,240,083 200,240,958
875 bp 72 TFs 0 linked genes
This 875 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:200,235,083 – 200,245,958
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
ATF2 2 datasets
ChIP HepG2 ENCFF955VER 79 bp overlap
ChIP K562 ENCFF139ZZG 84 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 265 bp overlap
BRD2 5 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 139 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 151 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 277 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 277 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 185 bp overlap
CDX2 1 dataset
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 247 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 233 bp overlap
CREBBP 1 dataset
ChIP fibroblast_senescent GSE106146.CREBBP.fibroblast_senescent 232 bp overlap
DIDO1 1 dataset
ChIP K-562 ENCSR167JBG.DIDO1.K-562 227 bp overlap
ELF1 3 datasets
ChIP A-549 GSE122203.ELF1.A-549 112 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 196 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 244 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 213 bp overlap
ChIP hESC GSE26097.EOMES.hESC 156 bp overlap
EP300 1 dataset
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 274 bp overlap
ERG 18 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 233 bp overlap
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 208 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 253 bp overlap
ChIP SEM GSE117864.ERG.SEM 205 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 230 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 277 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 254 bp overlap
ChIP aortic-endothelial-cell_D1 GSE139377.ERG.aortic-endothelial-cell_D1 214 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 198 bp overlap
ChIP aortic-endothelial-cell_D19 GSE139377.ERG.aortic-endothelial-cell_D19 157 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 172 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 207 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 206 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 240 bp overlap
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 165 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 222 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 189 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 151 bp overlap
ESR1 1 dataset
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 267 bp overlap
ETS1 8 datasets
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 241 bp overlap
ChIP HUVEC-C GSE109625.ETS1.HUVEC-C 193 bp overlap
ChIP HUVEC-C GSE93030.ETS1.HUVEC-C 193 bp overlap
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 222 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 246 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 222 bp overlap
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 182 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 252 bp overlap
ETV1 2 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 298 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 256 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 296 bp overlap
ETV3 1 dataset
Motif DE_36h DE_36h-ETV3_MA0763.2 9 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 211 bp overlap
FLI1 9 datasets
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 175 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 290 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 469 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 175 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 210 bp overlap
ChIP SEM GSE117864.FLI1.SEM 172 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 205 bp overlap
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 189 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 163 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 741 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 237 bp overlap
FOXP2 2 datasets
ChIP PFSK-1 ENCFF349WGE 239 bp overlap
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 179 bp overlap
GABPA 6 datasets
ChIP K-562 ENCSR290MUH.GABPA.K-562 395 bp overlap
ChIP K-562 ENCSR000BLO.GABPA.K-562 201 bp overlap
ChIP K562 ENCFF139LXS 271 bp overlap
ChIP K562 ENCFF996TSW 273 bp overlap
ChIP liver ENCFF500III 360 bp overlap
ChIP liver ENCSR350ORK.GABPA.liver 166 bp overlap
GABPB1 2 datasets
ChIP K-562 ENCSR138YYY.GABPB1.K-562 315 bp overlap
ChIP K562 ENCFF015GDS 211 bp overlap
GATA2 3 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 220 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 219 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 261 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 722 bp overlap
ChIP DE DE-GATA4-2 764 bp overlap
GATA6 10 datasets
ChIP AGS GSE51936.GATA6.AGS 88 bp overlap
ChIP DE DE-GATA6-1 653 bp overlap
ChIP DE DE-GATA6-2 745 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 813 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 801 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 714 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 783 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 866 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 806 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 632 bp overlap
IKZF1 1 dataset
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 197 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 210 bp overlap
KLF6 1 dataset
Motif DE_36h DE_36h-KLF6_MA1517.2 9 bp overlap
KMT2A 1 dataset
ChIP OCI-AML-3_VTP GSE129636.KMT2A.OCI-AML-3_VTP 228 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 225 bp overlap
MECOM 4 datasets
ChIP SKH1 GSE102697.MECOM.SKH1 163 bp overlap
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 145 bp overlap
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 169 bp overlap
ChIP SKH1_E2 GSE102697.MECOM.SKH1_E2 203 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 354 bp overlap
MTF1 1 dataset
Motif DE_36h DE_36h-MTF1_MA0863.1 14 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 226 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 143 bp overlap
ChIP MCF-7 ENCFF767RTQ 205 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 179 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 198 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 207 bp overlap
NFATC4 1 dataset
Motif DE_36h DE_36h-NFATC4_MA1525.3 9 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 284 bp overlap
NR3C1 1 dataset
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 263 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 367 bp overlap
POLR2A 5 datasets
ChIP SK-N-MC ENCFF088IVG 353 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 134 bp overlap
ChIP spleen ENCFF044PYR 129 bp overlap
ChIP spleen ENCFF446ZGT 219 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 224 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
RAD21 2 datasets
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 237 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 235 bp overlap
RELA 4 datasets
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 197 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 219 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 178 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 203 bp overlap
RUNX1 3 datasets
ChIP SKH1 GSE87283.RUNX1.SKH1 247 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 271 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 150 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 502 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 502 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 329 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 495 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 311 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 426 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 582 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 251 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 148 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 180 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 210 bp overlap
SPDEF 1 dataset
Motif DE_36h DE_36h-SPDEF_MA0686.2 10 bp overlap
SPI1 16 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 243 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 202 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 131 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 154 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 124 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 157 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 196 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 188 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 182 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 196 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 153 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 231 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 143 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 101 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 129 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 207 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 141 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 193 bp overlap
TFDP1 1 dataset
ChIP K-562 ENCSR224IKA.TFDP1.K-562 104 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 224 bp overlap
ZBTB11 1 dataset
Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 254 bp overlap
ChIP K562 ENCFF521DSV 368 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 63 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 720 bp overlap
ChIP K562 ENCFF547OSS 569 bp overlap
ZNF75D 1 dataset
Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap