chr10 : 118,759,576 – 118,760,773
1,197 bp 78 TFs 1 linked gene
This 1.2 kb open chromatin element is linked to CACUL1 and is bound by 78 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CACUL1 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:118,754,576 – 118,765,773
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
E2F6 5 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
ChIP H1 ENCFF785DWK 265 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 151 bp overlap
E2F8 3 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap
Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap
EGR1 1 dataset
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF2 3 datasets
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
Motif DE_24h DE_24h-ELF2_MA1483.3 10 bp overlap
Motif ES_0h ES_0h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELF4 3 datasets
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
Motif DE_24h DE_24h-ELF4_MA0641.1 12 bp overlap
Motif ES_0h ES_0h-ELF4_MA0641.1 12 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 384 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 402 bp overlap
ChIP DE DE-FOXA2-2 438 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 247 bp overlap
ChIP DE DE-GATA4-2 411 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 395 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 250 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 197 bp overlap
KLF11 2 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF13 2 datasets
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap
KLF15 2 datasets
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
NFKB1 3 datasets
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
Motif DE_24h DE_24h-NFKB1_MA0105.4 13 bp overlap
Motif ES_0h ES_0h-NFKB1_MA0105.4 13 bp overlap
NFYB 2 datasets
ChIP HepG2 ENCFF174VYX 144 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 52 bp overlap
NFYC 1 dataset
ChIP HepG2 ENCFF836FYP 301 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 2 datasets
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 2 datasets
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 402 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 430 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 293 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 356 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 483 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 523 bp overlap
PRDM9 3 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RELA 3 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap
Motif ES_0h ES_0h-RELA_MA0107.1 10 bp overlap
REST 2 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 218 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 414 bp overlap
RREB1 2 datasets
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 287 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 365 bp overlap
SP1 4 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
ChIP H1 ENCFF263FUH 243 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPDEF 3 datasets
Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap
Motif DE_24h DE_24h-SPDEF_MA0686.2 10 bp overlap
Motif ES_0h ES_0h-SPDEF_MA0686.2 10 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 445 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 391 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 263 bp overlap
TBR1 2 datasets
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX3 2 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
TFAP2E 2 datasets
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TFDP1 4 datasets
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
Motif DE_24h DE_24h-TFDP1_MA1122.2 8 bp overlap
Motif ES_0h ES_0h-TFDP1_MA1122.2 8 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Tfcp2l1 2 datasets
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 493 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 370 bp overlap
ZBTB7A 1 dataset
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZKSCAN3 2 datasets
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
Motif ES_0h ES_0h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF143 1 dataset
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF449 2 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF454 2 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF610 3 datasets
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
Motif DE_24h DE_24h-ZNF610_MA1713.2 10 bp overlap
Motif ES_0h ES_0h-ZNF610_MA1713.2 10 bp overlap
ZNF682 2 datasets
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF93 2 datasets
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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