chr1 : 188,128,607 – 188,129,111
504 bp 52 TFs 0 linked genes
This 504 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:188,123,607 – 188,134,111
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AR 25 datasets
ChIP LNCaP GSE80256.AR.LNCaP 255 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 142 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 235 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 194 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 194 bp overlap
ChIP LNCaP_D226N_shFOXA1_Ethanol GSE128883.AR.LNCaP_D226N_shFOXA1_Ethanol 143 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 186 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 225 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 264 bp overlap
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 184 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 188 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 191 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 188 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 107 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 232 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 202 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 182 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 228 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 172 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 205 bp overlap
ChIP VCaP GSE148358.AR.VCaP 137 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 308 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 165 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 76 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 112 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 237 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 80 bp overlap
BRD2 8 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 130 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 327 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 364 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 306 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 179 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 179 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 163 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 163 bp overlap
BRD4 4 datasets
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 205 bp overlap
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 268 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 223 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-075 302 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 161 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 222 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
CTCF 207 datasets
ChIP 22Rv1 ENCFF466OXN 431 bp overlap
ChIP 22Rv1 ENCFF466OXN 229 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 275 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 324 bp overlap
ChIP AG04449 ENCFF248MBD 173 bp overlap
ChIP AG04450 ENCFF116DJL 220 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 169 bp overlap
ChIP BE2C ENCFF757SRF 133 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 256 bp overlap
ChIP BJ ENCFF434HEC 239 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 163 bp overlap
ChIP C4-2B ENCFF821XVN 327 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 173 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 157 bp overlap
ChIP D721Med ENCFF513FYD 191 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 129 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 158 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 158 bp overlap
ChIP GM06990 ENCFF471OQT 239 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 176 bp overlap
ChIP GM12865 ENCFF067GFI 211 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 104 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 164 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 166 bp overlap
ChIP GM12878 ENCFF511URZ 143 bp overlap
ChIP GM12878 ENCFF635MMB 183 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 358 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 123 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 103 bp overlap
ChIP GM13977 ENCFF528ESQ 162 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 103 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 284 bp overlap
ChIP GM23338 ENCFF772DML 185 bp overlap
ChIP H1 ENCFF764RHO 201 bp overlap
ChIP H54 ENCFF255TVO 198 bp overlap
ChIP H9 ENCFF152GTF 181 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 150 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 109 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 145 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 101 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 130 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 320 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 242 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 142 bp overlap
ChIP HCT116 ENCFF003KHP 265 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 126 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 93 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 97 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 149 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 172 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 86 bp overlap
ChIP HFFc6 ENCFF005CJI 268 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 158 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 201 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 201 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 159 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 192 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 230 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 195 bp overlap
ChIP HeLa-S3 ENCFF565UFR 160 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 241 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 142 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 138 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 209 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 191 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 247 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 118 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 327 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 288 bp overlap
ChIP IMR-90 ENCFF887MRH 118 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 222 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 260 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 146 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 115 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 106 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 161 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 157 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 165 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 136 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 221 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 124 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 131 bp overlap
ChIP LNCAP ENCFF223HIG 210 bp overlap
ChIP LNCAP ENCFF700QXT 208 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 275 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 158 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 149 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 166 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 166 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 310 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 238 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 276 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 180 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 184 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 136 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 236 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 225 bp overlap
ChIP MCF-7 ENCFF139NQI 217 bp overlap
ChIP MCF-7 ENCFF162GNE 193 bp overlap
ChIP MCF-7 ENCFF198DQX 186 bp overlap
ChIP MCF-7 ENCFF210JUZ 281 bp overlap
ChIP MCF-7 ENCFF494VXA 186 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 111 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 240 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 230 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 208 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 167 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 161 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 153 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 216 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 239 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 206 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 132 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 163 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 233 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 198 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 198 bp overlap
ChIP OCI-LY1 ENCFF455ESK 345 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 163 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 210 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 290 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 206 bp overlap
ChIP PC-3 ENCFF487TUI 217 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 434 bp overlap
ChIP Panc1 ENCFF056JQX 381 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 369 bp overlap
ChIP RWPE2 ENCFF911IEE 246 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 141 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 282 bp overlap
ChIP SK-N-SH ENCFF731NJX 203 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 117 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 162 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 159 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 310 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 144 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 227 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 135 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 391 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 504 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 149 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 111 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 359 bp overlap
ChIP VCaP ENCFF858YQT 330 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 386 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 204 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 200 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 127 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 184 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 148 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 257 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 141 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 193 bp overlap
ChIP chondrocyte ENCFF134ORZ 198 bp overlap
ChIP chondrocyte ENCFF134ORZ 163 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 92 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 198 bp overlap
ChIP endodermal cell ENCFF471YCZ 167 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 168 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 169 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 158 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 166 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 133 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 228 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 272 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 233 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 154 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 172 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 185 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 123 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 199 bp overlap
ChIP erythroid_Don002 GSE137982.CTCF.erythroid_Don002 135 bp overlap
ChIP fibroblast of lung ENCFF356FDN 228 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 184 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 224 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 227 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 200 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 212 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 97 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 172 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 155 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 202 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 239 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 161 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 275 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 110 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 180 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 146 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 200 bp overlap
ChIP keratinocyte ENCFF667ULX 238 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 300 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 207 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 151 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 175 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 173 bp overlap
ChIP placenta ENCFF029PHY 178 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 186 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 149 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 161 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 118 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 144 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 339 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 197 bp overlap
ChIP smooth muscle cell ENCFF656FBT 207 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 171 bp overlap
ESR1 20 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 235 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_clone14 211 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 246 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 221 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 240 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 250 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 257 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 228 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 222 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 227 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 214 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 213 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 291 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 160 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 374 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 205 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 325 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 268 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 315 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 180 bp overlap
EZH2 2 datasets
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 367 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 141 bp overlap
FOXA1 54 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 295 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 300 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 188 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 212 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 216 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 203 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 265 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 261 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 236 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 289 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 184 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 226 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 144 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 319 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 265 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 251 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 165 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 242 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 222 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 196 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 241 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 202 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 176 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 203 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 163 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 157 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 139 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 232 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 293 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 285 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 215 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 164 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 259 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 256 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 212 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 200 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 203 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 218 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 192 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 265 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 272 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 362 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 193 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 152 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 209 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 276 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 218 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 286 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 195 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 280 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 183 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 199 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 200 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 163 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 240 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 190 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 222 bp overlap
FOXL2 2 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 157 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 276 bp overlap
GATA1 1 dataset
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 68 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 139 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 139 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 192 bp overlap
GATA3 3 datasets
ChIP MCF-7 ENCFF352QVM 340 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 297 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 211 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 243 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 253 bp overlap
HOXB13 13 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 239 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 114 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 180 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 115 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 200 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 143 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 218 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 322 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 167 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 143 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 169 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 202 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 364 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 178 bp overlap
JUN 2 datasets
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 252 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 231 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 117 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 182 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 285 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 174 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 213 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 245 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 405 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_PPARG_HYPO GSE50144.PPARG.HUVEC-C_PPARG_HYPO 123 bp overlap
RAD21 39 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 103 bp overlap
ChIP GM12878 ENCFF046CBW 232 bp overlap
ChIP GM12878 ENCFF101UQZ 58 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 199 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 160 bp overlap
ChIP H1 ENCFF698EWO 116 bp overlap
ChIP H1 ENCFF967OJF 213 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 199 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 294 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 168 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 212 bp overlap
ChIP HCT116 ENCFF568PEO 217 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 77 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 123 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 442 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 334 bp overlap
ChIP HeLa-S3 ENCFF775CHI 203 bp overlap
ChIP IMR-90 ENCFF752PTH 64 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 212 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 106 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 197 bp overlap
ChIP MCF-7 ENCFF694KOM 85 bp overlap
ChIP MCF-7 ENCFF724VCQ 166 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 286 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 262 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 241 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 216 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 181 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 152 bp overlap
ChIP SK-N-SH ENCFF747MAS 205 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 312 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 504 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 237 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 208 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 209 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 152 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 156 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 249 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 175 bp overlap
REST 1 dataset
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
RUNX1T1 2 datasets
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 146 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 159 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 186 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 244 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 166 bp overlap
SMC1 3 datasets
ChIP DKO GSE131606.SMC1.DKO 330 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 504 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 216 bp overlap
SMC1A 4 datasets
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 145 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 212 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 212 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 210 bp overlap
SMC3 12 datasets
ChIP GM12878 ENCFF085RLZ 244 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 219 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 219 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 219 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 504 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 221 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 132 bp overlap
ChIP HeLa-S3 ENCFF992MML 212 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 192 bp overlap
ChIP IMR-90 ENCFF627LON 200 bp overlap
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 198 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 133 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 226 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
STAG1 7 datasets
ChIP HCAEC GSE101921.STAG1.HCAEC 254 bp overlap
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 182 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 414 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 414 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 118 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 203 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 314 bp overlap
STAG2 2 datasets
ChIP HCAEC GSE101921.STAG2.HCAEC 231 bp overlap
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 146 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 248 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 127 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 169 bp overlap
TEAD4 2 datasets
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 126 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 232 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 290 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 4 datasets
Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 175 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 304 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 295 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 192 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 192 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 147 bp overlap
ZBTB7B 1 dataset
Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
Huangfu Lab · Publications · Resources · Contact