chr10 : 49,614,094 49,614,593
499 bp 66 TFs 2 linked genes
This 499 bp open chromatin element is linked to CHAT and SLC18A3 and is bound by 66 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
CHAT 987 bp At TSS Proximity
SLC18A3 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:49,609,094 – 49,619,593
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 129 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 282 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 499 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 499 bp overlap
BRD4 6 datasets
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 279 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 199 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 408 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 132 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 144 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 54 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 464 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 275 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 226 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ERG 4 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 199 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 220 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 221 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 218 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 415 bp overlap
EZH2 45 datasets
ChIP A673 ENCFF790MVL 264 bp overlap
ChIP GM23248 ENCFF404ZHM 118 bp overlap
ChIP GM23248 ENCFF404ZHM 57 bp overlap
ChIP GM23248 ENCFF506FWX 77 bp overlap
ChIP GM23248 ENCFF506FWX 298 bp overlap
ChIP GM23338 ENCFF613YON 178 bp overlap
ChIP GM23338 ENCFF613YON 296 bp overlap
ChIP GM23338 ENCFF886DXX 57 bp overlap
ChIP GM23338 ENCFF886DXX 69 bp overlap
ChIP H1 ENCFF232NZA 499 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 176 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 343 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 84 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 160 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 243 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 68 bp overlap
ChIP HepG2 ENCFF912EIW 155 bp overlap
ChIP K562 ENCFF494QJK 66 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 86 bp overlap
ChIP T-REx-293_K27WT GSE118954.EZH2.T-REx-293_K27WT 358 bp overlap
ChIP T-REx-293_K27WT_12h GSE118954.EZH2.T-REx-293_K27WT_12h 71 bp overlap
ChIP T-REx-293_K27WT_12h GSE118954.EZH2.T-REx-293_K27WT_12h 155 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 97 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 317 bp overlap
ChIP T98G GSE112240.EZH2.T98G 188 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 167 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 214 bp overlap
ChIP astrocyte ENCFF365JTP 207 bp overlap
ChIP astrocyte ENCFF365JTP 313 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 259 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 239 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 172 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 278 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 278 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 147 bp overlap
ChIP hESC GSE113817.EZH2.hESC 291 bp overlap
ChIP hepatocyte ENCFF552DZB 499 bp overlap
ChIP keratinocyte ENCFF070STK 122 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 69 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 73 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 89 bp overlap
ChIP neural cell ENCFF610EPB 174 bp overlap
ChIP neural progenitor cell ENCFF018MKA 499 bp overlap
ChIP neural progenitor cell ENCFF472NFV 499 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 65 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 383 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 499 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 100 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 344 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 403 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 286 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 157 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 217 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 134 bp overlap
KMT2A 1 dataset
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 231 bp overlap
MAFA 1 dataset
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 493 bp overlap
MTF1 1 dataset
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 160 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 248 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 322 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94782.MYCN.Kelly 97 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 167 bp overlap
NR2F2 1 dataset
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 246 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 462 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 239 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 454 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 118 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 168 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 333 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 352 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 499 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 499 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 389 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 451 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 301 bp overlap
STAT3 4 datasets
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 239 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 360 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 426 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 350 bp overlap
SUZ12 8 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 499 bp overlap
ChIP H1 ENCFF881NFR 499 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 224 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 147 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 424 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SUZ12.SYO-1_shRING1A-B 173 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 66 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 148 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 128 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 111 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 267 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 300 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 342 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 104 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 250 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 346 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap