chr9 : 35,962,229 – 35,962,473

244 bp 62 TFs 1 linked gene

This 244 bp open chromatin element is linked to YBX1P10 and is bound by 62 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
YBX1P10		9.8 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

62 transcription factors

AGO1 1 dataset

ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 105 bp overlap

ARID2 1 dataset

ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 244 bp overlap

ARNT 1 dataset

ChIP 501-mel GSE95280.ARNT.501-mel 157 bp overlap

ARNTL 1 dataset

ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 123 bp overlap

ATF4 1 dataset

ChIP K-562 ENCSR145TSJ.ATF4.K-562 206 bp overlap

BRD2 6 datasets

ChIP LPS141 GSE111253.BRD2.LPS141 157 bp overlap

ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 244 bp overlap

ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 105 bp overlap

ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 59 bp overlap

ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 59 bp overlap

ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 56 bp overlap

BRD4 3 datasets

ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 233 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 167 bp overlap

ChIP hESC GSE33281.BRD4.hESC 53 bp overlap

CDK9 1 dataset

ChIP HCT-116 GSE72622.CDK9.HCT-116 97 bp overlap

CDKN1B 2 datasets

ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 138 bp overlap

ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 146 bp overlap

CEBPB 1 dataset

ChIP IMR-90 ENCFF468UGY 133 bp overlap

CHD2 1 dataset

ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 189 bp overlap

CTBP1 1 dataset

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 91 bp overlap

ERG 1 dataset

ChIP MCF-7 GSE23730.ERG.MCF-7 207 bp overlap

ESR1 2 datasets

ChIP MCF-7 GSE48930.ESR1.MCF-7 64 bp overlap

ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 115 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 73 bp overlap

GTF2B 1 dataset

ChIP HeLa_ASYNC GSE71848.GTF2B.HeLa_ASYNC 244 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 116 bp overlap

HDAC2 2 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 65 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 54 bp overlap

HSF1 4 datasets

ChIP NCI-H838 GSE38901.HSF1.NCI-H838 199 bp overlap

ChIP U2OS_HEAT GSE60984.HSF1.U2OS_HEAT 146 bp overlap

ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 169 bp overlap

ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 207 bp overlap

IKZF1 1 dataset

ChIP K-562 ENCSR395HWC.IKZF1.K-562 244 bp overlap

INTS11 1 dataset

ChIP HeLa GSE125534.INTS11.HeLa 56 bp overlap

KLF3 1 dataset

ChIP keratinocyte GSE140991.KLF3.keratinocyte 219 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 240 bp overlap

MAF1 1 dataset

ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 145 bp overlap

MAX 2 datasets

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 244 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 200 bp overlap

MED1 1 dataset

ChIP VCaP GSE148358.MED1.VCaP 99 bp overlap

MED26 2 datasets

ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 244 bp overlap

ChIP U2OS_SHEP400 GSE73742.MED26.U2OS_SHEP400 149 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 138 bp overlap

MYC 2 datasets

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 195 bp overlap

ChIP P493-6_0HR GSE125863.MYC.P493-6_0HR 175 bp overlap

MYCN 1 dataset

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 99 bp overlap

MYOCD 1 dataset

ChIP A-549 GSE128921.MYOCD.A-549 142 bp overlap

MYOD1 4 datasets

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 244 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 147 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 171 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 156 bp overlap

NELFE 2 datasets

ChIP HeLa GSE125534.NELFE.HeLa 244 bp overlap

ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 88 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 244 bp overlap

NEUROG2 6 datasets

ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 244 bp overlap

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 244 bp overlap

ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 244 bp overlap

ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 244 bp overlap

ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 244 bp overlap

ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 244 bp overlap

NFKB1 2 datasets

ChIP HEK293T GSE129618.NFKB1.HEK293T 148 bp overlap

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 150 bp overlap

NR3C1 1 dataset

ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 127 bp overlap

OGG1 1 dataset

ChIP HEK293 GSE89017.OGG1.HEK293 94 bp overlap

PCBP1 2 datasets

ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 160 bp overlap

ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 176 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 231 bp overlap

POLR2A 1 dataset

ChIP H54 ENCFF398BXN 185 bp overlap

POLR2G 2 datasets

ChIP K562 ENCFF047BLG 78 bp overlap

ChIP K562 ENCFF648YPL 78 bp overlap

POU5F1 2 datasets

ChIP BG03 GSE21614.POU5F1.BG03 121 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 225 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 161 bp overlap

RBFOX2 3 datasets

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 138 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 138 bp overlap

ChIP K562 ENCFF196WTG 81 bp overlap

RUNX1 1 dataset

ChIP Jurkat GSE85524.RUNX1.Jurkat 174 bp overlap

RUVBL2 2 datasets

ChIP U2OS GSE130602.RUVBL2.U2OS 244 bp overlap

ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 121 bp overlap

SMARCA4 2 datasets

ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 244 bp overlap

ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 201 bp overlap

SMARCB1 1 dataset

ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 58 bp overlap

SOX4 1 dataset

ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 159 bp overlap

SOX8 1 dataset

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 70 bp overlap

SPI1 1 dataset

ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 134 bp overlap

SREBP2 1 dataset

ChIP HCC70 GSE126380.SREBP2.HCC70 132 bp overlap

SRSF3 1 dataset

ChIP K-562 GSE120104.SRSF3.K-562 148 bp overlap

STAT3 2 datasets

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 181 bp overlap

ChIP WA01 ERP004237.STAT3.WA01 126 bp overlap

SUPT5H 3 datasets

ChIP HeLa GSE125534.SUPT5H.HeLa 244 bp overlap

ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 109 bp overlap

ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 64 bp overlap

TCF21 1 dataset

ChIP HCASMC GSE124011.TCF21.HCASMC 193 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 181 bp overlap

TP63 1 dataset

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 173 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 180 bp overlap

YY2 1 dataset

ChIP HeLa GSE76856.YY2.HeLa 106 bp overlap

ZBTB7A 2 datasets

ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 199 bp overlap

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 118 bp overlap