chr7 : 139,783,741 139,783,987
246 bp 60 TFs 2 linked genes
This 246 bp open chromatin element is linked to TBXAS1 and HIPK2 and is bound by 60 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TBXAS1 5.6 kb Proximal Proximity
HIPK2 6.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:139,778,741 – 139,788,987
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 221 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 246 bp overlap
BCL11A 2 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 96 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 60 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 246 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 246 bp overlap
BRD4 7 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 163 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 204 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 204 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 194 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 194 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 149 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 137 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1 GSE116879.BRD9.MDA-MB-231_JQ1 223 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 113 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 84 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 116 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 237 bp overlap
CTCF 14 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 204 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 146 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 99 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 111 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 150 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 104 bp overlap
ChIP endodermal cell ENCFF471YCZ 246 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 246 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 246 bp overlap
ChIP esophagus squamous epithelium ENCFF571ODZ 246 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 195 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 120 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 164 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 70 bp overlap
DAXX 2 datasets
ChIP PC-3 GSE68647.DAXX.PC-3 246 bp overlap
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 235 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 151 bp overlap
ESR1 5 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 151 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 166 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 182 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 122 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 219 bp overlap
FOXA1 55 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 246 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 159 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 246 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 246 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 171 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 183 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 229 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 244 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 213 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 175 bp overlap
ChIP 22Rv1_TFS GSE123618.FOXA1.22Rv1_TFS 179 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 224 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 221 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 186 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 183 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 246 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 246 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 246 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 111 bp overlap
ChIP LNCaP-C4-2B GSE40050.FOXA1.LNCaP-C4-2B 246 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 216 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 233 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 166 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 170 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 187 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 246 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 135 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 225 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 156 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 246 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 215 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 209 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 228 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 181 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 140 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 246 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 246 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 154 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 246 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 246 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 246 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 191 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 230 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 161 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 159 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 144 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 246 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 215 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 195 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 246 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 235 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 152 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 201 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 174 bp overlap
FOXA2 13 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 246 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 246 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 220 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 246 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 159 bp overlap
ChIP DE DE-FOXA2-1 246 bp overlap
ChIP DE DE-FOXA2-2 246 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 183 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 246 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 243 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 246 bp overlap
ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 212 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 204 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 222 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 196 bp overlap
GATA4 3 datasets
ChIP foregut GSE117136.GATA4.foregut 246 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 246 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 142 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 246 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 111 bp overlap
HMBOX1 4 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 214 bp overlap
ChIP K562 ENCFF055GAZ 246 bp overlap
ChIP K562 ENCFF055GAZ 159 bp overlap
ChIP K562 ENCFF317JJX 246 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 246 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 167 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 188 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 199 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 246 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 246 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 246 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 241 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 206 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 126 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 219 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 133 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 180 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 200 bp overlap
POLR2A 1 dataset
ChIP esophagus squamous epithelium ENCFF708IOX 237 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 246 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF967OJF 171 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 88 bp overlap
ChIP K562 ENCFF066JWO 246 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 246 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 246 bp overlap
RELA 1 dataset
ChIP KB GSE52469.RELA.KB 55 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 245 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 193 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 174 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 246 bp overlap
SMARCA4 15 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 163 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 83 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 140 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 246 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 214 bp overlap
ChIP A-549_AG15687 GSE132290.SMARCA4.A-549_AG15687 246 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 145 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 141 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 123 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 69 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 149 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 173 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 196 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 217 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 188 bp overlap
SP2 1 dataset
ChIP HEK293 GSE76494.SP2.HEK293 123 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 246 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 246 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 211 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 135 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 174 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 139 bp overlap
TP63 5 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 186 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 194 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 137 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 137 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 132 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 233 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 200 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 57 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 62 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 246 bp overlap
ZBTB7A 3 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 139 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 154 bp overlap
ChIP K562 ENCFF579ZGM 246 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 150 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 115 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 163 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 170 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 166 bp overlap
ZNF512 3 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 113 bp overlap
ChIP K562 ENCFF455WDH 78 bp overlap
ChIP K562 ENCFF601EMZ 66 bp overlap