chr1 : 158,007,276 158,008,546
1,270 bp 89 TFs 0 linked genes
This 1.3 kb open chromatin element has no linked target genes and is bound by 89 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:158,002,276 – 158,013,546
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP GSE43720.AR.LNCaP 136 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 353 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 590 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 235 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 441 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 130 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 408 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 226 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 273 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 278 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 205 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 176 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 231 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 276 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 225 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 266 bp overlap
CTCF 15 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 226 bp overlap
ChIP GM23338 ENCFF531QOI 174 bp overlap
ChIP GM23338 ENCFF772DML 174 bp overlap
ChIP H1 ENCFF764RHO 191 bp overlap
ChIP H9 ENCFF152GTF 181 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 95 bp overlap
ChIP endodermal cell ENCFF471YCZ 189 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 155 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 140 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 117 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 117 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 227 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 159 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 103 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 114 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 204 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 260 bp overlap
ChIP BLaER1 ENCFF460KDD 251 bp overlap
EHF 1 dataset
Motif DE_24h DE_24h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 194 bp overlap
ESR1 5 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 271 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 295 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 400 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 380 bp overlap
ETS2 1 dataset
Motif DE_24h DE_24h-ETS2_MA1484.2 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 4 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 468 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 428 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 347 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 390 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 102 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 492 bp overlap
ChIP DE DE-GATA4-2 561 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 330 bp overlap
ChIP DE DE-GATA6-2 712 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 896 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 729 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 708 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 629 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 773 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 928 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 264 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 607 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 695 bp overlap
GLIS2 3 datasets
ChIP HEK293 ENCFF446EIF 511 bp overlap
ChIP HEK293 ENCFF446EIF 331 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 403 bp overlap
GLIS3 2 datasets
ChIP H9_plus GSE109562.GLIS3.H9_plus 239 bp overlap
ChIP H9_plus GSE109562.GLIS3.H9_plus 645 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 440 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 489 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 492 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 695 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 427 bp overlap
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 237 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 790 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 254 bp overlap
ChIP HEK293 ENCFF588INF 451 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 253 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 163 bp overlap
MED1 3 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 252 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 647 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 176 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 244 bp overlap
ChIP A-673 GSE119971.MYBL2.A-673 831 bp overlap
MYOD1 3 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 270 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 159 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 204 bp overlap
MYOG 1 dataset
Motif DE_24h DE_24h-MYOG_MA0500.3 8 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 483 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 152 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 323 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 291 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 312 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 198 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 127 bp overlap
NR1D1 1 dataset
Motif DE_24h DE_24h-NR1D1_MA1531.2 14 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 255 bp overlap
Olig2 1 dataset
Motif DE_24h DE_24h-Olig2_MA1997.2 6 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 300 bp overlap
ChIP islet ERP001456.PDX1.islet 117 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 869 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 839 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 244 bp overlap
ChIP NCCIT GSE71675.PRDM14.NCCIT 94 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 172 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 505 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 213 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 146 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 831 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 999 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 1110 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 845 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 806 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 1027 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 963 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 648 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 351 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 558 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 239 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 258 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 806 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 357 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 380 bp overlap
SPDEF 1 dataset
Motif DE_24h DE_24h-SPDEF_MA0686.2 10 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 305 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 345 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 368 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 384 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-DMSO GSE128673.TP53.Calu-1_MUT8-DMSO 472 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 212 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 393 bp overlap
Tcf12 1 dataset
Motif DE_24h DE_24h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_24h DE_24h-Twist2_MA0633.3 6 bp overlap
ZBTB11 1 dataset
Motif DE_24h DE_24h-ZBTB11_MA2329.1 9 bp overlap
ZBTB24 1 dataset
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 174 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 465 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 479 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 239 bp overlap
ZNF281 2 datasets
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ChIP K-562 GSE121133.ZNF281.K-562 204 bp overlap
ZNF320 1 dataset
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 357 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 272 bp overlap
ZNF454 1 dataset
Motif DE_24h DE_24h-ZNF454_MA1712.2 17 bp overlap
ZNF549 1 dataset
Motif DE_24h DE_24h-ZNF549_MA1728.2 8 bp overlap
ZNF610 1 dataset
Motif DE_24h DE_24h-ZNF610_MA1713.2 10 bp overlap
ZNF707 1 dataset
Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap
ZNF93 1 dataset
Motif DE_24h DE_24h-ZNF93_MA1721.2 14 bp overlap
Zic2 1 dataset
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap