chr7 : 93,981,521 – 93,982,012

491 bp 74 TFs 0 linked genes

This 491 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

ARRB1 1 dataset

ChIP prostate GSE55615.ARRB1.prostate 254 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 180 bp overlap

Arid3a 1 dataset

Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap

BCOR 1 dataset

ChIP WA01 GSE104690.BCOR.WA01 169 bp overlap

BRD4 1 dataset

ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 200 bp overlap

CHD2 1 dataset

ChIP WA01 ENCSR000EBT.CHD2.WA01 125 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 210 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCFF432ZEW 305 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 268 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 426 bp overlap

CTCF 1 dataset

ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 253 bp overlap

DPF2 2 datasets

ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 402 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 255 bp overlap

Dux 1 dataset

Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap

ELF4 1 dataset

Motif ES_0h ES_0h-ELF4_MA0641.1 12 bp overlap

EP300 3 datasets

ChIP H1 ENCFF927IYK 262 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 201 bp overlap

ChIP hESC GSE17917.EP300.hESC 255 bp overlap

ESR1 1 dataset

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 285 bp overlap

ETS1 1 dataset

ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 164 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 214 bp overlap

HDAC2 2 datasets

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 289 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 119 bp overlap

HOXA10 1 dataset

Motif ES_0h ES_0h-HOXA10_MA0899.2 9 bp overlap

HOXA3 1 dataset

Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap

HOXA4 1 dataset

Motif ES_0h ES_0h-HOXA4_MA1496.2 7 bp overlap

HOXB4 1 dataset

Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap

HOXB9 1 dataset

Motif ES_0h ES_0h-HOXB9_MA1503.2 9 bp overlap

HOXC10 1 dataset

Motif ES_0h ES_0h-HOXC10_MA0905.2 9 bp overlap

HOXC11 1 dataset

Motif ES_0h ES_0h-HOXC11_MA0651.3 11 bp overlap

HOXC12 1 dataset

Motif ES_0h ES_0h-HOXC12_MA0906.2 10 bp overlap

HOXC4 1 dataset

Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap

HOXC9 1 dataset

Motif ES_0h ES_0h-HOXC9_MA0485.3 9 bp overlap

HOXD10 1 dataset

Motif ES_0h ES_0h-HOXD10_MA1506.2 10 bp overlap

HOXD11 1 dataset

Motif ES_0h ES_0h-HOXD11_MA0908.2 9 bp overlap

HOXD12 1 dataset

Motif ES_0h ES_0h-HOXD12_MA0873.2 10 bp overlap

HOXD4 1 dataset

Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap

HOXD9 1 dataset

Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap

Hoxa11 1 dataset

Motif ES_0h ES_0h-Hoxa11_MA0911.2 9 bp overlap

JUN 1 dataset

ChIP HUES-8 GSE109524.JUN.HUES-8 303 bp overlap

KMT2C 2 datasets

ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 297 bp overlap

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 232 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 287 bp overlap

NANOG 11 datasets

ChIP GM23338 ENCFF065NZG 211 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 217 bp overlap

ChIP H1 ENCFF747ZPQ 192 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 407 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 280 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 351 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 397 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 304 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 278 bp overlap

ChIP hESC GSE20650.NANOG.hESC 129 bp overlap

ChIP hESC GSE18292.NANOG.hESC 142 bp overlap

NCOA2 1 dataset

ChIP MCF-7 ERP000901.NCOA2.MCF-7 195 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 228 bp overlap

NKX6-1 1 dataset

Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap

NKX6-3 1 dataset

Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap

NR3C1 1 dataset

ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 143 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 193 bp overlap

PAX3-FOXO1 1 dataset

ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 213 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 259 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 349 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 202 bp overlap

RELA 4 datasets

ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 108 bp overlap

ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 150 bp overlap

ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 150 bp overlap

ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 158 bp overlap

REST 1 dataset

ChIP WA01 ENCSR000BHM.REST.WA01 134 bp overlap

SIN3A 1 dataset

ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 267 bp overlap

SMARCA4 6 datasets

ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 228 bp overlap

ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 63 bp overlap

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 491 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 217 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 285 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 227 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 164 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 185 bp overlap

SOX13 1 dataset

Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap

SOX2 2 datasets

Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 233 bp overlap

SOX9 1 dataset

Motif ES_0h ES_0h-SOX9_MA0077.2 8 bp overlap

SP1 2 datasets

ChIP H1 ENCFF263FUH 245 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 243 bp overlap

SS18 2 datasets

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 177 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 332 bp overlap

STAT1 1 dataset

ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 380 bp overlap

Sox17 1 dataset

Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap

Sox3 1 dataset

Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap

Sox7 1 dataset

Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap

Stat5a::Stat5b 1 dataset

Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 251 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 229 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 224 bp overlap

TEAD1 1 dataset

ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 186 bp overlap

TEAD4 7 datasets

ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 238 bp overlap

ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 214 bp overlap

ChIP ESC S26-ESC-d0-TEAD4-exp1 359 bp overlap

ChIP H1 ENCFF778PAX 125 bp overlap

ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 171 bp overlap

ChIP hESC GSE99202.TEAD4.hESC 226 bp overlap

ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 214 bp overlap

USP7 1 dataset

ChIP HEK293T GSE61048.USP7.HEK293T 161 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 349 bp overlap

ZBTB17 1 dataset

Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap

ZNF114 2 datasets

ChIP GM23338 ENCFF631OSW 357 bp overlap

ChIP GM23338 ENCSR555KFE.ZNF114.GM23338 221 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 196 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 70 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 364 bp overlap