chr6 : 63,897,226 63,897,771
545 bp 61 TFs 0 linked genes
This 545 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:63,892,226 – 63,902,771
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AR 2 datasets
ChIP endometrial-stromal-cell GSE119432.AR.endometrial-stromal-cell 215 bp overlap
ChIP fibroblast_prostate-cancer_PCDF2 GSE126852.AR.fibroblast_prostate-cancer_PCDF2 372 bp overlap
ARNTL 5 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 394 bp overlap
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 378 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 394 bp overlap
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 394 bp overlap
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 332 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 285 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 281 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 270 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 224 bp overlap
BRCA1 1 dataset
ChIP SH-EP_pWZL-MYCNwt GSE111905.BRCA1.SH-EP_pWZL-MYCNwt 171 bp overlap
BRD4 7 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 529 bp overlap
ChIP HCC1395_JQ1 GSE63581.BRD4.HCC1395_JQ1 258 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 273 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 212 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 206 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 275 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 236 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 362 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 313 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 204 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 230 bp overlap
ELF1 1 dataset
ChIP SK-N-SH ENCSR000BTA.ELF1.SK-N-SH 125 bp overlap
EP300 5 datasets
ChIP SK-N-SH ENCFF451CNG 229 bp overlap
ChIP SK-N-SH ENCFF829RWA 286 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 437 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 234 bp overlap
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 439 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 218 bp overlap
EZH2 2 datasets
ChIP GM23248 ENCFF506FWX 346 bp overlap
ChIP GM23248 ENCFF506FWX 145 bp overlap
FOS 1 dataset
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 238 bp overlap
FOSL2 4 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 371 bp overlap
ChIP SK-N-SH ENCFF127ZDW 173 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 375 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 314 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 263 bp overlap
ChIP DE DE-FOXA2-1 367 bp overlap
ChIP DE DE-FOXA2-2 344 bp overlap
FOXL2 3 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 266 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 503 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 238 bp overlap
FOXM1 3 datasets
ChIP SK-N-SH ENCFF404RGX 433 bp overlap
ChIP SK-N-SH ENCFF404RGX 234 bp overlap
ChIP SK-N-SH ENCSR000BTB.FOXM1.SK-N-SH 381 bp overlap
GABPA 2 datasets
ChIP SK-N-SH ENCFF755TJJ 361 bp overlap
ChIP SK-N-SH ENCSR000BTG.GABPA.SK-N-SH 191 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 343 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 274 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 351 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 263 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 545 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 455 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 184 bp overlap
ChIP DE DE-GATA4-1 355 bp overlap
ChIP DE DE-GATA4-2 343 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 379 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 370 bp overlap
ChIP DE DE-GATA6-2 343 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 288 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 207 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 218 bp overlap
JUND 4 datasets
ChIP SK-N-SH ENCFF551NEQ 283 bp overlap
ChIP SK-N-SH ENCFF971JKN 290 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 385 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 347 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 334 bp overlap
MEF2A 1 dataset
ChIP SK-N-SH ENCSR000BVC.MEF2A.SK-N-SH 268 bp overlap
MYCN 1 dataset
ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 158 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 76 bp overlap
ChIP IMR-90_alpha-amanitin-1H GSE118494.NCAPH2.IMR-90_alpha-amanitin-1H 387 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 248 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 369 bp overlap
NR3C1 1 dataset
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 73 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 242 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 404 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 374 bp overlap
POU6F1 1 dataset
ChIP SK-N-SH ENCFF834EMP 172 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 198 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCFF635KBN 257 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCSR000BVG.RXRA.SK-N-SH 309 bp overlap
SIN3A 2 datasets
ChIP SK-N-SH ENCFF931NFD 186 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 353 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 545 bp overlap
SMAD3 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 494 bp overlap
SMARCA4 1 dataset
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 321 bp overlap
SMARCC1 1 dataset
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 252 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 248 bp overlap
SOX2 1 dataset
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 142 bp overlap
SS18-SSX 3 datasets
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 298 bp overlap
ChIP fibroblast_6aa GSE139053.SS18-SSX.fibroblast_6aa 54 bp overlap
ChIP fibroblast_7aa GSE139053.SS18-SSX.fibroblast_7aa 187 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 466 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 315 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 198 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 231 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 278 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 413 bp overlap
TOX 1 dataset
ChIP SK-N-SH ENCFF977TQV 199 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 111 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 361 bp overlap
YY1 2 datasets
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 209 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 247 bp overlap
ZBTB33 2 datasets
ChIP SK-N-SH ENCFF667JYU 314 bp overlap
ChIP SK-N-SH ENCSR000BTS.ZBTB33.SK-N-SH 363 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 206 bp overlap