chr5 : 136,738,905 – 136,739,593

688 bp 88 TFs 0 linked genes

This 688 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

88 transcription factors

ATF4 1 dataset

Motif DE_24h DE_24h-ATF4_MA0833.3 10 bp overlap

Atoh1 1 dataset

Motif DE_24h DE_24h-Atoh1_MA1467.3 7 bp overlap

CEBPA 1 dataset

Motif DE_24h DE_24h-CEBPA_MA0102.5 10 bp overlap

CEBPD 1 dataset

Motif DE_24h DE_24h-CEBPD_MA0836.3 8 bp overlap

ELK1::SREBF2 1 dataset

Motif DE_24h DE_24h-ELK1SREBF2_MA1933.2 15 bp overlap

ERF::HOXB13 1 dataset

Motif DE_24h DE_24h-ERFHOXB13_MA1937.2 13 bp overlap

ERF::SREBF2 1 dataset

Motif DE_24h DE_24h-ERFSREBF2_MA1939.2 16 bp overlap

ESR2 1 dataset

Motif DE_24h DE_24h-ESR2_MA0258.2 15 bp overlap

ETV1 1 dataset

Motif DE_24h DE_24h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_24h DE_24h-ETV2FOXI1_MA1942.2 11 bp overlap

Erg 1 dataset

Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_24h DE_24h-FLI1FOXI1_MA1950.2 11 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-2 271 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 362 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 688 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 643 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 255 bp overlap

HAND2 1 dataset

Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap

HMBOX1 1 dataset

Motif DE_24h DE_24h-HMBOX1_MA0895.2 7 bp overlap

HOXB13 1 dataset

Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap

HOXC13 1 dataset

Motif DE_24h DE_24h-HOXC13_MA0907.2 9 bp overlap

Irf1 1 dataset

Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 688 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 688 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 673 bp overlap

KLF1 1 dataset

Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap

KLF10 1 dataset

Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap

KLF11 1 dataset

Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap

KLF12 1 dataset

Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap

KLF14 1 dataset

Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap

KLF15 1 dataset

Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap

KLF16 1 dataset

Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap

KLF2 1 dataset

Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap

KLF4 1 dataset

Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap

KLF5 1 dataset

Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap

KLF7 1 dataset

Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap

MAFK 1 dataset

Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap

MEIS1 1 dataset

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 243 bp overlap

NEUROD1 1 dataset

Motif DE_24h DE_24h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_24h DE_24h-NEUROG2_MA1642.2 7 bp overlap

NFATC3 1 dataset

Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap

NFATC4 1 dataset

Motif DE_24h DE_24h-NFATC4_MA1525.3 9 bp overlap

NR2C1 1 dataset

Motif DE_24h DE_24h-NR2C1_MA1535.2 6 bp overlap

NR2C2 2 datasets

Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap

Motif DE_24h DE_24h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_24h DE_24h-NR2F1_MA0017.3 12 bp overlap

Neurod2 1 dataset

Motif DE_24h DE_24h-Neurod2_MA0668.3 8 bp overlap

Nfat5 1 dataset

Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 1 dataset

Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap

Nr1H2 1 dataset

Motif DE_24h DE_24h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_24h DE_24h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_24h DE_24h-Nr1h3_MA2337.1 6 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_24h DE_24h-Nr1h3Rxra_MA0494.2 16 bp overlap

Nr2F6 1 dataset

Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap

OSR2 1 dataset

Motif DE_24h DE_24h-OSR2_MA1646.2 8 bp overlap

PATZ1 1 dataset

Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 568 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 263 bp overlap

RARA 1 dataset

Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap

RELA 1 dataset

Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap

RELB 1 dataset

Motif DE_24h DE_24h-RELB_MA1117.2 7 bp overlap

RORA 1 dataset

Motif DE_24h DE_24h-RORA_MA0071.1 10 bp overlap

RORB 1 dataset

Motif DE_24h DE_24h-RORB_MA1150.2 10 bp overlap

RORC 1 dataset

Motif DE_24h DE_24h-RORC_MA1151.2 10 bp overlap

Rarg 1 dataset

Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 354 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 517 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 283 bp overlap

SP1 1 dataset

Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap

SP2 1 dataset

Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap

SP3 1 dataset

Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap

SP4 1 dataset

Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap

SP9 1 dataset

Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap

SPIB 1 dataset

Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap

TBP 1 dataset

Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap

TBX19 1 dataset

Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap

THRB 1 dataset

Motif DE_24h DE_24h-THRB_MA1574.2 13 bp overlap

TWIST1 1 dataset

Motif DE_24h DE_24h-TWIST1_MA1123.3 8 bp overlap

Wt1 1 dataset

Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap

Yy1 1 dataset

Motif DE_24h DE_24h-Yy1_MA0095.4 8 bp overlap

ZIC4 1 dataset

Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap

ZIM3 1 dataset

Motif DE_24h DE_24h-ZIM3_MA1709.2 11 bp overlap

ZNF148 1 dataset

Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap

ZNF16 1 dataset

Motif DE_24h DE_24h-ZNF16_MA1654.2 21 bp overlap

ZNF324 1 dataset

Motif DE_24h DE_24h-ZNF324_MA1977.2 14 bp overlap

ZNF341 1 dataset

Motif DE_24h DE_24h-ZNF341_MA1655.2 8 bp overlap

ZNF449 1 dataset

Motif DE_24h DE_24h-ZNF449_MA1656.2 10 bp overlap

ZNF454 1 dataset

Motif DE_24h DE_24h-ZNF454_MA1712.2 17 bp overlap

ZNF528 1 dataset

Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap

ZNF707 1 dataset

Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap

ZNF85 1 dataset

Motif DE_24h DE_24h-ZNF85_MA1720.2 12 bp overlap

Zfp335 1 dataset

Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap