chr5 : 127,941,636 – 127,941,904
268 bp 68 TFs 1 linked gene
This 268 bp open chromatin element is linked to CCDC192 and is bound by 68 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CCDC192 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:127,936,636 – 127,946,904
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AR 4 datasets
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 80 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.AR.prostate-cancer_PDX_136 177 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 238 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 249 bp overlap
ARNT 1 dataset
ChIP PC-3 GSE130989.ARNT.PC-3 205 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 153 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 268 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 87 bp overlap
BRD4 7 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 268 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 171 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 234 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 210 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 268 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 245 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 182 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 169 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 194 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 268 bp overlap
CREBBP 2 datasets
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 75 bp overlap
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 242 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 268 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 268 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 268 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 268 bp overlap
CTCF 4 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 221 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 268 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 268 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 268 bp overlap
CTNNB1 2 datasets
ChIP LS180 GSE31939.CTNNB1.LS180 80 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 195 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 103 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 268 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 214 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 147 bp overlap
ChIP PC-3 GSE147455.EP300.PC-3 140 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 268 bp overlap
FOXA1 15 datasets
ChIP HepG2 ENCFF207NVJ 105 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 246 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 81 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 56 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 268 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 268 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 268 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 85 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 119 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 241 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 268 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 268 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 268 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 150 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 83 bp overlap
FOXA2 8 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 262 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 135 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 222 bp overlap
ChIP DE DE-FOXA2-2 268 bp overlap
ChIP PC-3_GSK GSE148982.FOXA2.PC-3_GSK 79 bp overlap
ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 268 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 111 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 144 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 158 bp overlap
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 230 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 268 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 74 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 192 bp overlap
HIF1A 3 datasets
ChIP MDA-MB-231 GSE108833.HIF1A.MDA-MB-231 124 bp overlap
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 214 bp overlap
ChIP PC-3_hypoxia_siSMAD3 GSE106305.HIF1A.PC-3_hypoxia_siSMAD3 175 bp overlap
HOXB13 4 datasets
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 98 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 259 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 107 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 86 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 218 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 215 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 172 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 144 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 199 bp overlap
ChIP LS180 GSE39277.MED1.LS180 123 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 268 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 268 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 268 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 268 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 172 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 75 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 203 bp overlap
NELFE 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 204 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 268 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 245 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 268 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 268 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 268 bp overlap
NEUROG2 4 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 253 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 268 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 247 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 226 bp overlap
NFIC 1 dataset
ChIP Hep-G2 ENCSR000BQX.NFIC.Hep-G2 106 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 246 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 186 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 268 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 268 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 194 bp overlap
OTX2 2 datasets
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 268 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 194 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 191 bp overlap
PGR_B 1 dataset
ChIP hESC GSE62475.PGR_B.hESC 117 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 268 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 249 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 213 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 194 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 268 bp overlap
RAD21 4 datasets
ChIP GP5D GSE51234.RAD21.GP5D 229 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 268 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 268 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 268 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 164 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 268 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 268 bp overlap
SKI 3 datasets
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 219 bp overlap
ChIP HepG2 ENCFF631IPX 164 bp overlap
ChIP HepG2 ENCFF631IPX 268 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 110 bp overlap
SMAD3-HIF1A 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 178 bp overlap
SMARCA4 5 datasets
ChIP NGP GSE134626.SMARCA4.NGP 149 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 250 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 225 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 268 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 266 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 268 bp overlap
SNAI2 2 datasets
ChIP RD GSE137168.SNAI2.RD 142 bp overlap
ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 154 bp overlap
SOX2 7 datasets
ChIP HNSC GSE69479.SOX2.HNSC 268 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 254 bp overlap
ChIP NPC GSE122631.SOX2.NPC 268 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 268 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 139 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 183 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 191 bp overlap
SOX5 2 datasets
ChIP HepG2 ENCFF470KZD 268 bp overlap
ChIP HepG2 ENCFF470KZD 151 bp overlap
STAT3 1 dataset
ChIP MDA-MB-361 GSE152203.STAT3.MDA-MB-361 161 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 268 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 227 bp overlap
TCF4 3 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 155 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 225 bp overlap
ChIP LS180_125 GSE31939.TCF4.LS180_125 77 bp overlap
TEAD4 1 dataset
ChIP Hep-G2 ENCSR000BRP.TEAD4.Hep-G2 134 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 231 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 140 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 186 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 268 bp overlap
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