chr5 : 126,858,422 126,858,879
457 bp 74 TFs 0 linked genes
This 457 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:126,853,422 – 126,863,879
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 214 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 288 bp overlap
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
BRD4 3 datasets
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 234 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 393 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 298 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 166 bp overlap
CTCF 55 datasets
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF531QOI 194 bp overlap
ChIP GM23338 ENCFF772DML 116 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 273 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 203 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 242 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 193 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 199 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 195 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 319 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 224 bp overlap
ChIP VCaP ENCFF858YQT 457 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 305 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 202 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 189 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 159 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 328 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 266 bp overlap
ChIP endodermal cell ENCFF471YCZ 198 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 294 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 266 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 313 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 384 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 152 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 171 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 202 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 273 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 210 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 135 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 293 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 268 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 292 bp overlap
ChIP keratinocyte ENCFF046PBT 154 bp overlap
ChIP keratinocyte ENCFF291YDC 154 bp overlap
ChIP keratinocyte ENCFF667ULX 320 bp overlap
ChIP keratinocyte ENCFF805QIE 333 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 419 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 287 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 345 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 200 bp overlap
ChIP keratinocyte_mut1 GSE123711.CTCF.keratinocyte_mut1 154 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 190 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 271 bp overlap
ChIP placenta ENCFF029PHY 377 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 254 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 166 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 214 bp overlap
ChIP smooth muscle cell ENCFF656FBT 329 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 258 bp overlap
CTCFL 1 dataset
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 239 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 210 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 155 bp overlap
ELK1 2 datasets
Motif DE_12h DE_12h-ELK1_MA0028.3 9 bp overlap
Motif ES_0h ES_0h-ELK1_MA0028.3 9 bp overlap
ELK3 2 datasets
Motif DE_12h DE_12h-ELK3_MA0759.3 9 bp overlap
Motif ES_0h ES_0h-ELK3_MA0759.3 9 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 144 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV4 2 datasets
Motif DE_12h DE_12h-ETV4_MA0764.4 9 bp overlap
Motif ES_0h ES_0h-ETV4_MA0764.4 9 bp overlap
ETV6 2 datasets
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
Motif ES_0h ES_0h-ETV6_MA0645.2 9 bp overlap
ETV7 2 datasets
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Motif ES_0h ES_0h-ETV7_MA1708.2 9 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GATA1 1 dataset
Motif ES_0h ES_0h-GATA1_MA0035.5 7 bp overlap
HIF1A 1 dataset
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MAX 2 datasets
ChIP WTC11 ENCFF223QFY 457 bp overlap
ChIP WTC11 ENCFF223QFY 288 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
NANOG 2 datasets
ChIP WA09 GSE105028.NANOG.WA09 453 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 338 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NR1D1 1 dataset
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 289 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 338 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 214 bp overlap
RAD21 14 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 169 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 140 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 351 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 309 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 158 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 294 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 200 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 164 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 163 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 226 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 180 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 256 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 2 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 171 bp overlap
REST 1 dataset
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 215 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 162 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 235 bp overlap
SMC1 2 datasets
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 257 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 240 bp overlap
SMC1A 1 dataset
ChIP MCF-7 GSE115602.SMC1A.MCF-7 218 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 316 bp overlap
STAG1 3 datasets
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 241 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 204 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 150 bp overlap
STAG2 2 datasets
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 225 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 213 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 254 bp overlap
TEAD4 6 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 266 bp overlap
ChIP H1 ENCFF778PAX 115 bp overlap
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 287 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 237 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 337 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 159 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 457 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 457 bp overlap
TP63 1 dataset
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 237 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 324 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 288 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 180 bp overlap
USF2 2 datasets
ChIP H1 ENCFF434EDF 277 bp overlap
ChIP WTC11 ENCFF139JAW 318 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 138 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 271 bp overlap
ChIP MCF-7 ENCFF622BUU 321 bp overlap
ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 211 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 171 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF143 2 datasets
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 160 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 187 bp overlap
ZNF157 1 dataset
Motif ES_0h ES_0h-ZNF157_MA2331.1 21 bp overlap
ZNF454 1 dataset
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic3 1 dataset
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap