chr4 : 182,140,630 – 182,141,608
978 bp 58 TFs 2 linked genes
This 978 bp open chromatin element is linked to TENM3 and ENSG00000248266 and is bound by 58 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TENM3 2.4 kb Proximal Proximity
ENSG00000248266 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:182,135,630 – 182,146,608
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 255 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 749 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 508 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 183 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 172 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 493 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 185 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 392 bp overlap
BRD4 3 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 340 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 555 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 199 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 234 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 175 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 185 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 349 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 217 bp overlap
CTCF 11 datasets
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 164 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 202 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 281 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 182 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 138 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 411 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 147 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 424 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 188 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 491 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 363 bp overlap
ChIP BLaER1 ENCFF460KDD 377 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 332 bp overlap
EP300 3 datasets
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 399 bp overlap
ChIP tibial nerve ENCFF346AYA 505 bp overlap
ChIP tibial nerve ENCFF346AYA 303 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 15 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 71 bp overlap
ChIP GM23338 ENCFF613YON 178 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 236 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 216 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 148 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 320 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 183 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 346 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 323 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 284 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 575 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 550 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 842 bp overlap
ChIP hepatocyte ENCFF552DZB 71 bp overlap
ChIP neural progenitor cell ENCFF472NFV 614 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 397 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 244 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 213 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 213 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 266 bp overlap
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 315 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 313 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 293 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 584 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 243 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 141 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 350 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 205 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 243 bp overlap
MITF 1 dataset
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 276 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 293 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 314 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 491 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 550 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 281 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 173 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 189 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 256 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 255 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 671 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 552 bp overlap
RELA 1 dataset
ChIP BJAB_4h-activation GSE117250.RELA.BJAB_4h-activation 156 bp overlap
RNF2 4 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 487 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 435 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 227 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 268 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 289 bp overlap
SMARCA4 1 dataset
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 354 bp overlap
SMARCC1 2 datasets
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 317 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 262 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 97 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 315 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 233 bp overlap
SS18 3 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 273 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 569 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 277 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 189 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 699 bp overlap
SUZ12 5 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 443 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 297 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 677 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 218 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 210 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 485 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 253 bp overlap
TEAD1 2 datasets
ChIP CCLP1 GSE62272.TEAD1.CCLP1 143 bp overlap
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 428 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 399 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 167 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 150 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 405 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 337 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 145 bp overlap
ZNF611 1 dataset
ChIP HEK293T GSE78099.ZNF611.HEK293T 147 bp overlap
ZSCAN16 2 datasets
ChIP HEK293 ENCFF533NFT 361 bp overlap
ChIP HEK293 ENCSR864VJE.ZSCAN16.HEK293 237 bp overlap
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