chr4 : 79,050,351 79,050,916
565 bp 63 TFs 0 linked genes
This 565 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:79,045,351 – 79,055,916
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 251 bp overlap
AR 4 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 103 bp overlap
ChIP LNCaP_DHTTHZ1 GSE125245.AR.LNCaP_DHTTHZ1 141 bp overlap
ChIP VCaP GSE148358.AR.VCaP 57 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 159 bp overlap
ARID1A 2 datasets
ChIP NGP GSE134626.ARID1A.NGP 210 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 126 bp overlap
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 222 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 181 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 245 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 192 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 413 bp overlap
BRD2 4 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 371 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 319 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 59 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 169 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 205 bp overlap
BRD4 12 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 306 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 371 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 565 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 477 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 372 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 563 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 565 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 83 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 218 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 199 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 111 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 223 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 88 bp overlap
CDX2 2 datasets
ChIP LS180_125 GSE31939.CDX2.LS180_125 257 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 452 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 85 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 479 bp overlap
CTCF 10 datasets
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 203 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 189 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 302 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 109 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 181 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 158 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 289 bp overlap
ChIP islet ERP004003.CTCF.islet 308 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 207 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 84 bp overlap
ChIP BLaER1 ENCFF262VBH 95 bp overlap
ChIP BLaER1 ENCFF364PUR 182 bp overlap
E2F1 2 datasets
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 97 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 327 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 79 bp overlap
ERG 11 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 122 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 167 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 167 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 91 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 107 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 111 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 106 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 115 bp overlap
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 93 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 92 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 55 bp overlap
EZH2 1 dataset
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 167 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 163 bp overlap
FOXA1 16 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 409 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 183 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 434 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 246 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 263 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 326 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 304 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 326 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 281 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 302 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 398 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 565 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 433 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 194 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 335 bp overlap
FOXA2 6 datasets
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 188 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 248 bp overlap
ChIP DE DE-FOXA2-1 485 bp overlap
ChIP DE DE-FOXA2-2 510 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 315 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 416 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 56 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 400 bp overlap
ChIP DE DE-GATA4-2 443 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 496 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 328 bp overlap
ChIP DE DE-GATA6-2 452 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 409 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 327 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 328 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 300 bp overlap
HOXB13 6 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 148 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 87 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 209 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 118 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 210 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 149 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 331 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 269 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 183 bp overlap
MAX 3 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 230 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 565 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 565 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 565 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 445 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 396 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 565 bp overlap
MYCN 2 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 540 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 197 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 242 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 479 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 203 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 338 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 454 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 436 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 420 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 394 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 375 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 369 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 314 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 282 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 523 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 337 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 207 bp overlap
PAX6 1 dataset
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 213 bp overlap
PDX1 4 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 393 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 426 bp overlap
ChIP islet ERP001456.PDX1.islet 227 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 169 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 152 bp overlap
POU5F1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 218 bp overlap
RAD21 4 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 171 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 251 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 106 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 319 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 342 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 419 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 546 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 124 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 113 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 177 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 404 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 285 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 300 bp overlap
SMARCA4 5 datasets
ChIP NGP GSE134626.SMARCA4.NGP 227 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 71 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 565 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 470 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 244 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 513 bp overlap
SPI1 1 dataset
ChIP NB4 GSE128834.SPI1.NB4 186 bp overlap
TLE3 1 dataset
ChIP 22Rv1_WT3_Crispr GSE123618.TLE3.22Rv1_WT3_Crispr 131 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 319 bp overlap
ChIP K562 ENCFF875HLX 303 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 113 bp overlap