chr4 : 8,435,765 – 8,436,370
605 bp 58 TFs 4 linked genes
This 605 bp open chromatin element is linked to 4 target genes and is bound by 58 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TRMT44 at TSS At TSS Proximity
ACOX3 7.3 kb Proximal Proximity
ENSG00000251615 77.7 kb Distal Multiome
GPR78 144.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:8,430,765 – 8,441,370
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ASH2L 3 datasets
ChIP GM12878 ENCFF655FLB 317 bp overlap
ChIP GM12878 ENCFF655FLB 521 bp overlap
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 213 bp overlap
BCL11A 4 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 56 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 99 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 73 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 77 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 81 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 175 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 202 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 243 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 151 bp overlap
CDK9 1 dataset
ChIP MM1-S_DMSO GSE42355.CDK9.MM1-S_DMSO 186 bp overlap
CTCF 4 datasets
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 190 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 173 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 351 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 188 bp overlap
Cebpa 7 datasets
ChIP BLaER1 ENCFF031ISE 149 bp overlap
ChIP BLaER1 ENCFF093OYK 314 bp overlap
ChIP BLaER1 ENCFF364PUR 336 bp overlap
ChIP BLaER1 ENCFF460KDD 498 bp overlap
ChIP BLaER1 ENCFF508JZF 216 bp overlap
ChIP BLaER1 ENCFF844FIP 147 bp overlap
ChIP BLaER1 ENCFF858JKM 168 bp overlap
ETS1 1 dataset
ChIP K562 ENCFF688UQG 381 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 358 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 110 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 95 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 184 bp overlap
ChIP erythroblast ENCFF867JAR 351 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 263 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 176 bp overlap
ChIP K562 ENCFF088XQT 143 bp overlap
ChIP K562 ENCFF544PCK 229 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 360 bp overlap
ChIP DE DE-GATA4-2 484 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 379 bp overlap
ChIP DE DE-GATA6-2 350 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 400 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 429 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 486 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 311 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 326 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 341 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 121 bp overlap
IRF1 6 datasets
ChIP K-562 GSE129380.IRF1.K-562 180 bp overlap
ChIP K-562 ENCSR000EGL.IRF1.K-562 76 bp overlap
ChIP K-562 ENCSR000EGK.IRF1.K-562 74 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 175 bp overlap
ChIP K562 ENCFF277KTJ 269 bp overlap
ChIP K562 ENCFF277KTJ 472 bp overlap
IRF2 3 datasets
ChIP K-562 ENCSR376WCJ.IRF2.K-562 192 bp overlap
ChIP K562 ENCFF248LJZ 161 bp overlap
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 114 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 194 bp overlap
MAX 4 datasets
ChIP K562 ENCFF110LJS 351 bp overlap
ChIP K562 ENCFF398VJM 537 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 334 bp overlap
MAZ 1 dataset
ChIP GM12878 ENCFF404CEP 347 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 175 bp overlap
MNT 3 datasets
ChIP K562 ENCFF820IGH 375 bp overlap
ChIP K562 ENCFF820IGH 591 bp overlap
ChIP K562 ENCFF820IGH 459 bp overlap
MYC 2 datasets
ChIP K-562 ENCSR000EZU.MYC.K-562 130 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 139 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF788MPU 272 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 212 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 183 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 69 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 156 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCFF285BQQ 217 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 258 bp overlap
ChIP K562 ENCFF236IUS 457 bp overlap
POLR2A 19 datasets
ChIP GM12878 ENCFF263VRI 418 bp overlap
ChIP GM12878 ENCFF263VRI 462 bp overlap
ChIP GM12878 ENCFF412KAE 358 bp overlap
ChIP GM12878 ENCFF521FXC 226 bp overlap
ChIP GM12891 ENCFF012SUT 460 bp overlap
ChIP GM12891 ENCFF127ICP 399 bp overlap
ChIP GM12891 ENCFF379FCI 448 bp overlap
ChIP GM12892 ENCFF245LYF 449 bp overlap
ChIP GM12892 ENCFF245LYF 501 bp overlap
ChIP GM12892 ENCFF506PGQ 422 bp overlap
ChIP GM12892 ENCFF542ZFO 498 bp overlap
ChIP GM12892 ENCFF542ZFO 293 bp overlap
ChIP GM15510 ENCFF880HVJ 418 bp overlap
ChIP GM18505 ENCFF311CYB 444 bp overlap
ChIP GM18951 ENCFF079KKO 193 bp overlap
ChIP GM19099 ENCFF726IBN 426 bp overlap
ChIP GM19193 ENCFF599VTO 413 bp overlap
ChIP K562 ENCFF514URW 343 bp overlap
ChIP Raji ENCFF613VGX 322 bp overlap
POU1F1 1 dataset
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
POU2F2 4 datasets
Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap
ChIP GM12878 ENCFF207RKY 143 bp overlap
ChIP GM12891 ENCFF166YPP 311 bp overlap
ChIP GM12891 ENCSR000BII.POU2F2.GM12891 132 bp overlap
POU2F3 1 dataset
Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
POU3F4 1 dataset
Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap
POU5F1 1 dataset
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
POU5F1B 1 dataset
Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap
RELA 4 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 101 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 83 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 127 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 147 bp overlap
RELB 1 dataset
ChIP GM12878 ENCFF217ADF 543 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 338 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 433 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 388 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 416 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 324 bp overlap
SMAD5 2 datasets
ChIP GM12878 ENCFF178LKN 294 bp overlap
ChIP GM12878 ENCFF178LKN 465 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 451 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 315 bp overlap
SPI1 8 datasets
ChIP GM12878 ENCFF134LCP 297 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 190 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 150 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 191 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 186 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 153 bp overlap
TAF1 3 datasets
ChIP GM12878 ENCFF746UKX 331 bp overlap
ChIP GM12878 ENCSR000BGS.TAF1.GM12878 163 bp overlap
ChIP GM12891 ENCFF254YPA 337 bp overlap
TAL1 6 datasets
ChIP CD34 GSE52924.TAL1.CD34 163 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 177 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 167 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 155 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 166 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 134 bp overlap
TBP 1 dataset
ChIP GM12878 ENCFF571OXR 385 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 64 bp overlap
ChIP K562 ENCFF931DJY 276 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 327 bp overlap
ChIP K562 ENCFF319QZT 257 bp overlap
VEZF1 2 datasets
ChIP K562 ENCFF053XDV 436 bp overlap
ChIP K562 ENCFF053XDV 605 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 137 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 108 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 215 bp overlap
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