chr3 : 170,040,096 170,040,615
519 bp 56 TFs 1 linked gene
This 519 bp open chromatin element is linked to GPR160 and is bound by 56 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GPR160 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:170,035,096 – 170,045,615
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AHR 2 datasets
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 317 bp overlap
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 156 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 257 bp overlap
ASH2L 2 datasets
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 118 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 331 bp overlap
BCOR 5 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 336 bp overlap
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 145 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 158 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 433 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 201 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 277 bp overlap
BRD3 1 dataset
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 276 bp overlap
BRD4 3 datasets
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 52 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 358 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 209 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 223 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 314 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 314 bp overlap
CTCF 3 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 259 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 214 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 221 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 184 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 128 bp overlap
ESR1 9 datasets
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 103 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 207 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 129 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 169 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 207 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 175 bp overlap
ChIP MCF-7_shFbxo_E2_4OHT_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT_SRC-3 117 bp overlap
ChIP MCF-7_shFbxo_OHT_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_OHT_SRC-3 117 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 203 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 155 bp overlap
EZH2 18 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 519 bp overlap
ChIP GM23248 ENCFF404ZHM 258 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 308 bp overlap
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 168 bp overlap
ChIP astrocyte ENCFF365JTP 519 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 406 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 468 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 372 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 294 bp overlap
ChIP fibroblast of lung ENCFF479BAW 233 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 402 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 270 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 299 bp overlap
ChIP keratinocyte ENCFF070STK 414 bp overlap
ChIP keratinocyte ENCFF070STK 187 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 419 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 182 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 299 bp overlap
FOXA1 8 datasets
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 128 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 89 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 100 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 74 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 175 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 246 bp overlap
ChIP prostate_P1_T GSE130408.FOXA1.prostate_P1_T 257 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 245 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 251 bp overlap
ChIP DE DE-FOXA2-2 354 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 243 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 163 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 80 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 139 bp overlap
ChIP DE DE-GATA6-2 291 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 342 bp overlap
HDAC2 1 dataset
ChIP GM12878 ENCSR330OEO.HDAC2.GM12878 68 bp overlap
HOXB13 12 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 138 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 98 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 180 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 283 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 309 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 269 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 273 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 259 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 211 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 227 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 210 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 200 bp overlap
KMT2A 4 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 270 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 237 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 432 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 343 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 410 bp overlap
MAFK 1 dataset
ChIP WA01 ENCSR000EBS.MAFK.WA01 143 bp overlap
MED1 1 dataset
ChIP VCaP GSE148358.MED1.VCaP 208 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 309 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 242 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 280 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 183 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 254 bp overlap
MYC 2 datasets
ChIP GP5D GSE51234.MYC.GP5D 130 bp overlap
ChIP NB69 GSE138295.MYC.NB69 103 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 308 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 209 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 180 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 81 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 289 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 169 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 132 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 367 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 322 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 473 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 447 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 218 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 188 bp overlap
POLR2A 1 dataset
ChIP GM18505 ENCFF311CYB 362 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 384 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 337 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 104 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 63 bp overlap
RNF2 2 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 519 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 458 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 336 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 435 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 432 bp overlap
SMARCA4 2 datasets
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 219 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 197 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 100 bp overlap
SUZ12 5 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 454 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 289 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 223 bp overlap
ChIP ProEs GSE59087.SUZ12.ProEs 195 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 180 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 118 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 141 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 109 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 230 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 313 bp overlap