chr3 : 161,349,636 – 161,349,790

154 bp 64 TFs 0 linked genes

This 154 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

64 transcription factors

ARID1A 1 dataset

ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 154 bp overlap

BRCA2 1 dataset

ChIP MCF-7 ENCFF531NNL 125 bp overlap

BRD2 3 datasets

ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 102 bp overlap

ChIP SUM159PT_JQ1_MGSK2801 GSE116879.BRD2.SUM159PT_JQ1_MGSK2801 68 bp overlap

ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 135 bp overlap

BRD4 14 datasets

ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 137 bp overlap

ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 137 bp overlap

ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 56 bp overlap

ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 93 bp overlap

ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 154 bp overlap

ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 94 bp overlap

ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 103 bp overlap

ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 154 bp overlap

ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 142 bp overlap

ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 72 bp overlap

ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 154 bp overlap

ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 117 bp overlap

ChIP SW480 GSE110473.BRD4.SW480 62 bp overlap

ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 53 bp overlap

CBX1 1 dataset

ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 75 bp overlap

CDK9 1 dataset

ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 154 bp overlap

CREB3L4 1 dataset

Motif DE_12h DE_12h-CREB3L4_MA1474.2 10 bp overlap

ERG 1 dataset

ChIP RWPE-1 GSE114241.ERG.RWPE-1 69 bp overlap

ESR1 7 datasets

ChIP MCF-7 GSE76893.ESR1.MCF-7 149 bp overlap

ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 113 bp overlap

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 76 bp overlap

ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 111 bp overlap

ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 124 bp overlap

ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 147 bp overlap

ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 141 bp overlap

ESR1_Y537N 2 datasets

ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 153 bp overlap

ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 154 bp overlap

ESR1_Y537S 2 datasets

ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 154 bp overlap

ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 154 bp overlap

FOSL1 1 dataset

ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 142 bp overlap

FOSL2 2 datasets

ChIP MCF-7 ENCFF188KBZ 77 bp overlap

ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 67 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 154 bp overlap

GATA3 1 dataset

ChIP MCF-7 ENCFF437NQS 150 bp overlap

GATA4 1 dataset

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 154 bp overlap

HDAC2 1 dataset

ChIP PC-3 GSE147455.HDAC2.PC-3 136 bp overlap

HIC1 1 dataset

ChIP HEK293 ENCSR803GYT.HIC1.HEK293 154 bp overlap

HNF4A 1 dataset

ChIP GP5D GSE51234.HNF4A.GP5D 58 bp overlap

IKZF1 2 datasets

ChIP GM12878 ENCFF616FJX 102 bp overlap

ChIP GM12878 ENCFF824TGK 131 bp overlap

JUN 2 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 87 bp overlap

ChIP T-cell GSE136853.JUN.T-cell 99 bp overlap

JUNB 2 datasets

ChIP CD4 GSE116695.JUNB.CD4 127 bp overlap

ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 154 bp overlap

JUND 1 dataset

ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 57 bp overlap

MED1 1 dataset

ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 154 bp overlap

MED26 2 datasets

ChIP HCT-116 GSE121355.MED26.HCT-116 154 bp overlap

ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 154 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 154 bp overlap

MTA2 1 dataset

ChIP GM12878 ENCSR293QAR.MTA2.GM12878 154 bp overlap

NFATC2 1 dataset

ChIP CD4 GSE116695.NFATC2.CD4 81 bp overlap

NFKB1 1 dataset

ChIP CD4-pos GSE126505.NFKB1.CD4-pos 97 bp overlap

NIPBL 1 dataset

ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 110 bp overlap

NR1H2 1 dataset

ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 113 bp overlap

OVOL1 1 dataset

ChIP MCF-7 ENCFF537GWI 154 bp overlap

PHIP 2 datasets

ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 154 bp overlap

ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 154 bp overlap

PML 1 dataset

ChIP MCF-7 ENCFF839EHA 120 bp overlap

PRDM6 1 dataset

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 57 bp overlap

PROX1 1 dataset

ChIP SW480 GSE60390.PROX1.SW480 145 bp overlap

RELA 1 dataset

ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 88 bp overlap

RELB 1 dataset

ChIP GM12878 ENCSR387QUV.RELB.GM12878 143 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 154 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 154 bp overlap

SMAD3 2 datasets

ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 105 bp overlap

ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 103 bp overlap

SMARCA2 3 datasets

ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 154 bp overlap

ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 154 bp overlap

ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 154 bp overlap

SMARCA4 5 datasets

ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 154 bp overlap

ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 95 bp overlap

ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 154 bp overlap

ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 80 bp overlap

ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 154 bp overlap

SMARCB1 3 datasets

ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 87 bp overlap

ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 154 bp overlap

ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 154 bp overlap

SMARCC1 1 dataset

ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 154 bp overlap

SMC1A 1 dataset

ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 76 bp overlap

SPDEF 1 dataset

ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 154 bp overlap

STAT1 1 dataset

ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 96 bp overlap

SUPT5H 1 dataset

ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 96 bp overlap

TARDBP 1 dataset

ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 154 bp overlap

TCF7L2 2 datasets

ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 99 bp overlap

ChIP LNCaP GSE51621.TCF7L2.LNCaP 154 bp overlap

TEAD1 1 dataset

ChIP keratinocyte GSE138727.TEAD1.keratinocyte 54 bp overlap

TP63 4 datasets

ChIP BxPC-3 GSE115461.TP63.BxPC-3 97 bp overlap

ChIP JHU-029 GSE88859.TP63.JHU-029 94 bp overlap

ChIP SUIT-2 GSE115461.TP63.SUIT-2 154 bp overlap

ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 154 bp overlap

TRIM28 1 dataset

ChIP HEK293 ENCFF265CEM 111 bp overlap

ZFP37 1 dataset

ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 154 bp overlap

ZNF10 1 dataset

ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 87 bp overlap

ZNF101 1 dataset

ChIP HEK293 ENCSR462FWS.ZNF101.HEK293 103 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 154 bp overlap

ZNF366 2 datasets

ChIP HEK293 ENCFF799ATK 110 bp overlap

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 62 bp overlap

ZNF394 1 dataset

ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 77 bp overlap

ZNF418 1 dataset

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

ZNF639 1 dataset

ChIP HEK293 ENCSR080CST.ZNF639.HEK293 65 bp overlap

ZNF660 1 dataset

ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 68 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap