chr3 : 150,324,674 – 150,325,563
889 bp 71 TFs 0 linked genes
This 889 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:150,319,674 – 150,330,563
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AFF4 2 datasets
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 353 bp overlap
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 192 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 333 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 321 bp overlap
ChIP K562 ENCFF938UXQ 541 bp overlap
ASCL1 2 datasets
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 184 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 143 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 118 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 262 bp overlap
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 145 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF521IZR 286 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 214 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 148 bp overlap
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 264 bp overlap
BRD2 1 dataset
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 177 bp overlap
BRD4 2 datasets
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 177 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 610 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 347 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 511 bp overlap
ChIP K562 ENCFF673OEZ 275 bp overlap
CEBPB 2 datasets
ChIP HeLa-S3 ENCFF722WEG 265 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 51 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 108 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 310 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 108 bp overlap
ChIP K562 ENCFF180STA 301 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 299 bp overlap
DUX4 1 dataset
ChIP HEK293 GSE75791.DUX4.HEK293 278 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 310 bp overlap
ESR1 5 datasets
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 141 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 97 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 115 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 227 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 190 bp overlap
ESR1_Y537N 1 dataset
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 203 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 209 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 184 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 91 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR000BMV.FOSL1.K-562 141 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 514 bp overlap
ChIP DE DE-FOXA2-2 533 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 200 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 143 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 156 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 178 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 254 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 186 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 214 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 132 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 248 bp overlap
GATA2 5 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 151 bp overlap
ChIP CD34_DMSO GSE60792.GATA2.CD34_DMSO 316 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 141 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 248 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 279 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 184 bp overlap
ChIP DE DE-GATA4-1 637 bp overlap
ChIP DE DE-GATA4-2 750 bp overlap
ChIP foregut GSE117136.GATA4.foregut 472 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 521 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 555 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 698 bp overlap
ChIP DE DE-GATA6-2 875 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 361 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 527 bp overlap
ChIP foregut GSE117136.GATA6.foregut 384 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 418 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 443 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 371 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 135 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 317 bp overlap
ChIP K562 ENCFF968WBH 521 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 389 bp overlap
ChIP K-562 GSE140325.HDAC2.K-562 113 bp overlap
ChIP K562 ENCFF744ALD 156 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 468 bp overlap
ChIP K562 ENCFF055GAZ 245 bp overlap
ChIP K562 ENCFF317JJX 234 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 378 bp overlap
ID3 2 datasets
ChIP K-562 ENCSR005NMT.ID3.K-562 702 bp overlap
ChIP K562 ENCFF170RNI 481 bp overlap
KDM1A 6 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 266 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 314 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 207 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 290 bp overlap
ChIP K562 ENCFF128TYE 461 bp overlap
ChIP K562 ENCFF133OLU 461 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 161 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 205 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 161 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 355 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 249 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 118 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 421 bp overlap
ChIP K562 ENCFF221HJH 272 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 286 bp overlap
ChIP K562 ENCFF004YPK 391 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 392 bp overlap
ChIP K562 ENCFF674RQA 457 bp overlap
NR3C1 2 datasets
ChIP HeLa-B2_TA GSE24518.NR3C1.HeLa-B2_TA 168 bp overlap
ChIP HeLa-B2_TA_TNFA GSE24518.NR3C1.HeLa-B2_TA_TNFA 166 bp overlap
NR4A1 4 datasets
ChIP K-562 ENCSR000DJW.NR4A1.K-562 226 bp overlap
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 312 bp overlap
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 113 bp overlap
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 433 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 112 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 165 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 165 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 167 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
RELA 2 datasets
ChIP HeLa-B2_GRKD_DMSO GSE24518.RELA.HeLa-B2_GRKD_DMSO 102 bp overlap
ChIP HeLa-B2_TNFA GSE24518.RELA.HeLa-B2_TNFA 198 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 470 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 240 bp overlap
SMARCC1 1 dataset
ChIP HeLa-S3 ENCSR000EDM.SMARCC1.HeLa-S3 405 bp overlap
SNAI2 2 datasets
ChIP RD GSE137168.SNAI2.RD 309 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 393 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 318 bp overlap
SOX2 2 datasets
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 219 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 288 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 371 bp overlap
ChIP K562 ENCFF059YCJ 143 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 218 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 435 bp overlap
STAT1 1 dataset
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 220 bp overlap
TAL1 13 datasets
ChIP CD34 GSE52924.TAL1.CD34 138 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 139 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 276 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 272 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 237 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 174 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 174 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 209 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 250 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 197 bp overlap
ChIP K562 ENCFF620GMX 385 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 257 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 283 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 114 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 236 bp overlap
TEAD1 1 dataset
ChIP CCLP1 GSE62272.TEAD1.CCLP1 107 bp overlap
TP73_DELTANP 1 dataset
ChIP SaOS-2 GSE15780.TP73_DELTANP.SaOS-2 221 bp overlap
TRIM24 1 dataset
ChIP K-562 ENCSR957LDM.TRIM24.K-562 192 bp overlap
ZKSCAN1 1 dataset
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 182 bp overlap
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