chr3 : 150,022,775 – 150,023,384

609 bp 84 TFs 0 linked genes

This 609 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

84 transcription factors

BCL6 1 dataset

ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 201 bp overlap

BCOR 1 dataset

ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 177 bp overlap

BHLHE22 1 dataset

Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap

BORCS8-MEF2B,MEF2B 1 dataset

ChIP GM12878 ENCFF427QAI 475 bp overlap

BRD4 2 datasets

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 263 bp overlap

ChIP SW480 GSE110473.BRD4.SW480 94 bp overlap

CREBBP 1 dataset

ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 299 bp overlap

Cebpa 3 datasets

ChIP BLaER1 ENCFF031ISE 116 bp overlap

ChIP BLaER1 ENCFF274GAT 462 bp overlap

ChIP BLaER1 ENCFF364PUR 55 bp overlap

DPF2 2 datasets

ChIP GM12878 ENCFF681AJV 390 bp overlap

ChIP GM12878 ENCSR509FWH.DPF2.GM12878 337 bp overlap

EBF1 6 datasets

Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap

ChIP GM12878 ENCFF167CZS 85 bp overlap

ChIP GM12878 ENCFF813OXE 262 bp overlap

ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 353 bp overlap

ChIP LCL GSE75503.EBF1.LCL 305 bp overlap

ChIP MUTUL GSE75503.EBF1.MUTUL 521 bp overlap

EBF3 1 dataset

Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap

EHF 1 dataset

Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap

ELF1 3 datasets

Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap

ChIP GM12878 ENCSR841NDX.ELF1.GM12878 166 bp overlap

ELF3 1 dataset

Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap

ELK4 1 dataset

Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap

ETV1 1 dataset

Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV6 1 dataset

Motif DE_36h DE_36h-ETV6_MA0645.2 9 bp overlap

ETV7 1 dataset

Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap

Ebf2 1 dataset

Motif DE_36h DE_36h-Ebf2_MA1604.2 9 bp overlap

Ebf4 1 dataset

Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap

Elf5 1 dataset

Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap

Erg 1 dataset

Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap

FLI1 1 dataset

ChIP SEM GSE117864.FLI1.SEM 124 bp overlap

FOSL2 1 dataset

ChIP LPS141 GSE111253.FOSL2.LPS141 216 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_36h DE_36h-FOXJ2ELF1_MA1952.2 11 bp overlap

GABPA 1 dataset

Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 461 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-2 326 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 351 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap

GATAD2B 1 dataset

ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 233 bp overlap

IKZF1 6 datasets

ChIP GM12878 ENCFF753XDO 201 bp overlap

ChIP GM12878 ENCFF753XDO 535 bp overlap

ChIP GM12878 ENCFF824TGK 339 bp overlap

ChIP K-562 ENCSR395HWC.IKZF1.K-562 250 bp overlap

ChIP K562 ENCFF348IBL 393 bp overlap

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 575 bp overlap

IKZF2 1 dataset

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

IKZF3 1 dataset

ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 535 bp overlap

Ikzf3 2 datasets

Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap

JUND 2 datasets

ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 432 bp overlap

ChIP SK-N-SH ENCFF551NEQ 58 bp overlap

KLF5 1 dataset

ChIP ESO-26 GSE132680.KLF5.ESO-26 354 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 176 bp overlap

MAFK 2 datasets

ChIP A549 ENCFF371EPR 321 bp overlap

ChIP IMR-90 ENCFF336DHZ 242 bp overlap

MED 1 dataset

ChIP SEM GSE83671.MED.SEM 259 bp overlap

MEF2B 1 dataset

ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 516 bp overlap

MTA2 2 datasets

ChIP RH4 GSE155861.MTA2.RH4 205 bp overlap

ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 422 bp overlap

MYC 1 dataset

ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 105 bp overlap

NFE2 3 datasets

ChIP K-562 ENCSR552YGL.NFE2.K-562 289 bp overlap

ChIP K562 ENCFF047YKA 332 bp overlap

ChIP K562 ENCFF163BSI 247 bp overlap

NFE2L2 3 datasets

ChIP A-549 GSE113497.NFE2L2.A-549 221 bp overlap

ChIP IMR-90 ENCFF059WEE 232 bp overlap

ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 153 bp overlap

NHLH1 1 dataset

Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap

NHLH2 1 dataset

Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap

NR2F1 1 dataset

ChIP GM12878 ENCFF273VKX 342 bp overlap

NRF1 1 dataset

ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 450 bp overlap

Neurod2 1 dataset

Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap

Olig2 1 dataset

Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap

PAX5 1 dataset

ChIP GM12878 ENCSR000BHD.PAX5.GM12878 148 bp overlap

POU2AF1 1 dataset

ChIP pre-B-cell GSE107886.POU2AF1.pre-B-cell 222 bp overlap

POU2F1 1 dataset

Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap

POU2F2 1 dataset

Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 196 bp overlap

POU3F2 1 dataset

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap

POU4F1 1 dataset

Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap

POU4F2 1 dataset

Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap

POU4F3 1 dataset

Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap

POU5F1 1 dataset

Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap

POU5F1B 1 dataset

Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap

RARA 1 dataset

Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap

Rarb 1 dataset

Motif DE_36h DE_36h-Rarb_MA0858.1 17 bp overlap

SIX1 1 dataset

Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap

SIX2 1 dataset

Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap

SPI1 1 dataset

ChIP NB4 GSE128834.SPI1.NB4 171 bp overlap

SPIB 1 dataset

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

Six4 1 dataset

Motif DE_36h DE_36h-Six4_MA2001.2 7 bp overlap

Spi1 1 dataset

Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap

TCF12 1 dataset

ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 160 bp overlap

TCF3 1 dataset

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 469 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 138 bp overlap

Tcf12 1 dataset

Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap

ZBTB11 1 dataset

Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap

ZBTB6 1 dataset

Motif DE_36h DE_36h-ZBTB6_MA1581.2 9 bp overlap

ZBTB7A 1 dataset

Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap

ZNF175 1 dataset

Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap

ZNF184 1 dataset

Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap

ZNF652 1 dataset

Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap

ZNF766 1 dataset

Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap