chr3 : 134,797,433 134,797,779
346 bp 56 TFs 2 linked genes
This 346 bp open chromatin element is linked to ENSG00000286982 and EPHB1 and is bound by 56 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000286982 940 bp At TSS Proximity
EPHB1 2.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:134,792,433 – 134,802,779
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 346 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 346 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 203 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 324 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 67 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 346 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 142 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 199 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 166 bp overlap
CTCF 18 datasets
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 144 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 309 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 191 bp overlap
ChIP GM12872 ENCFF697BYI 130 bp overlap
ChIP GM12873 ENCFF711LOS 158 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 89 bp overlap
ChIP GM12878 ENCFF485TGR 182 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 89 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 143 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 238 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 248 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 125 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 127 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 335 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 346 bp overlap
ChIP neural progenitor cell ENCFF420RBO 237 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 346 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 196 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 346 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 346 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 310 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF692SMY 346 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 289 bp overlap
ERG 2 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 305 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 276 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 77 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 325 bp overlap
ETS1 4 datasets
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 256 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 165 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 276 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 256 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 205 bp overlap
EZH2 12 datasets
ChIP A673 ENCFF790MVL 89 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 341 bp overlap
ChIP H1 ENCFF232NZA 346 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 342 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 266 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 71 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 112 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 196 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 346 bp overlap
ChIP fibroblast of lung ENCFF479BAW 98 bp overlap
ChIP neural progenitor cell ENCFF472NFV 73 bp overlap
ChIP neural progenitor cell ENCFF472NFV 277 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 193 bp overlap
FOXA1 1 dataset
ChIP LS180 GSE140533.FOXA1.LS180 52 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 171 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 245 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 146 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 157 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 142 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 346 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 274 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 130 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 346 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 346 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 134 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 346 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 346 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 112 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 86 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 174 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 186 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 107 bp overlap
POLR2A 3 datasets
ChIP spleen ENCFF044PYR 191 bp overlap
ChIP spleen ENCFF446ZGT 244 bp overlap
ChIP spleen ENCFF706IUS 228 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 202 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 341 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 346 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 167 bp overlap
ChIP neural cell ENCFF564MOT 97 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 346 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 304 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 130 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 90 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 162 bp overlap
SUZ12 1 dataset
ChIP H1 ENCFF881NFR 346 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 322 bp overlap
WRNIP1 2 datasets
ChIP GM12878 ENCFF384UKU 137 bp overlap
ChIP GM12878 ENCFF384UKU 346 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCFF346DYM 220 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 346 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 346 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 248 bp overlap