chr3 : 98,574,188 98,574,469
281 bp 61 TFs 1 linked gene
This 281 bp open chromatin element is linked to ENSG00000286602 and is bound by 61 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000286602 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:98,569,188 – 98,579,469
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
BATF 1 dataset
ChIP GM12878 ENCFF954REE 212 bp overlap
BCL11A 2 datasets
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 131 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 104 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 225 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 63 bp overlap
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 163 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 266 bp overlap
ChIP K562 ENCFF963TXY 119 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 281 bp overlap
ChIP K562 ENCFF673OEZ 281 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 271 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 157 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 156 bp overlap
ChIP K562 ENCFF180STA 281 bp overlap
CTCF 4 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 168 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 236 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 132 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 183 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 166 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 219 bp overlap
EGR1 1 dataset
ChIP HCT116 ENCFF456NPQ 205 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 73 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 180 bp overlap
ChIP DE DE-FOXA2-1 262 bp overlap
GATA1 11 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 281 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 258 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 252 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 203 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 200 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 281 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 250 bp overlap
ChIP erythroblast ENCFF867JAR 281 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 281 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 253 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 281 bp overlap
GATA2 8 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 281 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 281 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 188 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 126 bp overlap
ChIP K562 ENCFF513FTZ 281 bp overlap
ChIP K562 ENCFF544PCK 245 bp overlap
ChIP K562 ENCFF830LLA 281 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 177 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 257 bp overlap
ChIP DE DE-GATA4-1 281 bp overlap
ChIP DE DE-GATA4-2 281 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 281 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 281 bp overlap
ChIP DE DE-GATA6-2 281 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 281 bp overlap
GFI1B 1 dataset
ChIP CD34 GSE52924.GFI1B.CD34 192 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 193 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 258 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 135 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 153 bp overlap
JUNB 3 datasets
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 129 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 221 bp overlap
ChIP K562 ENCFF388SEP 281 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 87 bp overlap
KLF16 1 dataset
ChIP K-562 ENCSR760UVO.KLF16.K-562 150 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 268 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 254 bp overlap
MAF 1 dataset
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 281 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 128 bp overlap
MED1 1 dataset
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 156 bp overlap
MEN1 1 dataset
ChIP HCT-116_B1 GSE152144.MEN1.HCT-116_B1 186 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 168 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 211 bp overlap
MYNN 3 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 185 bp overlap
ChIP K562 ENCFF399UNK 271 bp overlap
ChIP K562 ENCFF399UNK 61 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 276 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 161 bp overlap
ChIP ProEs GSE59087.NFE2.ProEs 237 bp overlap
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 69 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 140 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 94 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 135 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 281 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 281 bp overlap
POLR2A 2 datasets
ChIP K562 ENCFF514URW 281 bp overlap
ChIP erythroblast ENCFF498VMR 281 bp overlap
SMAD4 1 dataset
ChIP HGrC1_WT GSE138496.SMAD4.HGrC1_WT 61 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 189 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 281 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 64 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 126 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 122 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 281 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 281 bp overlap
TAF1 1 dataset
ChIP GM12891 ENCFF254YPA 278 bp overlap
TAL1 14 datasets
ChIP CD34 GSE52924.TAL1.CD34 248 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 237 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 123 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 256 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 244 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 202 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 190 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 232 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 214 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 272 bp overlap
ChIP K562 ENCFF620GMX 281 bp overlap
ChIP K562 ENCFF661CCK 262 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 267 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 268 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 281 bp overlap
ChIP K562 ENCFF931DJY 281 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 197 bp overlap
TCF7L2 2 datasets
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 118 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 257 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 281 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 269 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 269 bp overlap