chr2 : 237,615,920 – 237,616,550
630 bp 59 TFs 1 linked gene
This 630 bp open chromatin element is linked to ENSG00000227107 and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000227107 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:237,610,920 – 237,621,550
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 212 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 200 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 117 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 361 bp overlap
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 135 bp overlap
BCL6B 1 dataset
Motif DE_72h DE_72h-BCL6B_MA0731.1 17 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 172 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 161 bp overlap
BRD4 7 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 229 bp overlap
ChIP HUVEC-C GSE53998.BRD4.HUVEC-C 60 bp overlap
ChIP HUVEC-C_modETS1 GSE93030.BRD4.HUVEC-C_modETS1 86 bp overlap
ChIP HUVEC-C_modGFP GSE93030.BRD4.HUVEC-C_modGFP 171 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 215 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 130 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 218 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 195 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 113 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 214 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 251 bp overlap
CTCF 6 datasets
ChIP GSC23 GSE139416.CTCF.GSC23 269 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 244 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 110 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 162 bp overlap
ChIP heart left ventricle ENCFF987PUT 75 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 89 bp overlap
EP300 1 dataset
ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.EP300.pulmonary-artery_endothelial-cell_siCtrl 170 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 58 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 127 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 200 bp overlap
EZH2 2 datasets
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 297 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 498 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-2 324 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 187 bp overlap
GATA2 3 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF905PYM 371 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 171 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 95 bp overlap
ChIP DE DE-GATA4-1 630 bp overlap
ChIP DE DE-GATA4-2 630 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 584 bp overlap
ChIP foregut GSE117136.GATA4.foregut 471 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 291 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 366 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 273 bp overlap
ChIP DE DE-GATA6-2 630 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 331 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 630 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 391 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 413 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 365 bp overlap
ChIP foregut GSE117136.GATA6.foregut 275 bp overlap
GLYR1 1 dataset
ChIP HepG2 ENCFF114PDZ 445 bp overlap
HDAC2 3 datasets
ChIP HepG2 ENCFF429WTD 208 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 123 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 86 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 235 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 630 bp overlap
HNF1A 1 dataset
ChIP HEE_1 GSE76376.HNF1A.HEE_1 103 bp overlap
IKZF1 2 datasets
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 228 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 104 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 134 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 540 bp overlap
MED1 5 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 509 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 630 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 630 bp overlap
ChIP RH4 GSE83726.MED1.RH4 198 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 164 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 230 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 207 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 296 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 440 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_ctrl_OIS GSE118494.NCAPH2.IMR-90_ctrl_OIS 54 bp overlap
NR3C1 2 datasets
ChIP A-549 ENCSR000BJR.NR3C1.A-549 107 bp overlap
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 51 bp overlap
Nr5A2 1 dataset
Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 89 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 630 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 182 bp overlap
PRDM1 1 dataset
Motif DE_72h DE_72h-PRDM1_MA0508.4 7 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 381 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 277 bp overlap
RELA 4 datasets
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 268 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 158 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 139 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 196 bp overlap
RREB1 1 dataset
Motif DE_72h DE_72h-RREB1_MA0073.2 19 bp overlap
SKI 1 dataset
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 162 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 349 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 158 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 55 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 70 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 385 bp overlap
SMARCB1 2 datasets
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 348 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 268 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 563 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 478 bp overlap
SPIB 1 dataset
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 121 bp overlap
Spi1 1 dataset
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 342 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 230 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 100 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 255 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 212 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 86 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 91 bp overlap
ZKSCAN1 1 dataset
ChIP Hep-G2 ENCSR157CAU.ZKSCAN1.Hep-G2 115 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 161 bp overlap
ZNF217 2 datasets
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 182 bp overlap
ChIP HepG2 ENCFF455XGO 401 bp overlap
ZNF646 1 dataset
ChIP HepG2 ENCFF141MBP 221 bp overlap
ZNF746 1 dataset
ChIP HepG2 ENCFF056LOE 433 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 136 bp overlap
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