chr2 : 198,499,576 198,499,888
312 bp 75 TFs 0 linked genes
This 312 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:198,494,576 – 198,504,888
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
AR 1 dataset
ChIP endometrial-stromal-cell GSE119432.AR.endometrial-stromal-cell 135 bp overlap
BRD4 2 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 279 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 172 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 57 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 209 bp overlap
CTCF 2 datasets
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 254 bp overlap
E2F1 1 dataset
ChIP HMEC-1 GSE62425.E2F1.HMEC-1 249 bp overlap
EGR1 6 datasets
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 226 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 166 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 144 bp overlap
ChIP K562 ENCFF006PJY 175 bp overlap
ChIP T-HESCs GSE141063.EGR1.T-HESCs 255 bp overlap
EGR2 2 datasets
Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap
ChIP HEK293 ENCFF336LFH 138 bp overlap
EGR3 1 dataset
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 224 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 211 bp overlap
FOS 1 dataset
ChIP leiomyoma_PT967 GSE128230.FOS.leiomyoma_PT967 55 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 277 bp overlap
KDM1A 3 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 213 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 311 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 298 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 221 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 220 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 213 bp overlap
LMO2 2 datasets
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 192 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 158 bp overlap
MED1 8 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 215 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 203 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 135 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 295 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 212 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 295 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 249 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 185 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 221 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 312 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 258 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 276 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 283 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 258 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 266 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 310 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 279 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 176 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 184 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 188 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 159 bp overlap
NR3C1 4 datasets
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 81 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 163 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 60 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 187 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 234 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 3 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 192 bp overlap
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 266 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 187 bp overlap
PGR 3 datasets
ChIP endometrium_Midsecretory GSE132712.PGR.endometrium_Midsecretory 126 bp overlap
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 143 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 256 bp overlap
POLR2A 3 datasets
ChIP spleen ENCFF446ZGT 221 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 243 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 169 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 136 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 312 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP SGBS GSE64233.RELA.SGBS 203 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 312 bp overlap
RUNX1 1 dataset
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 183 bp overlap
SMAD4 1 dataset
ChIP HGrC1_EV GSE138496.SMAD4.HGrC1_EV 111 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 174 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 233 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 240 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 248 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 192 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 165 bp overlap
STAT1 3 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 199 bp overlap
ChIP SET-2_cortistatin-A GSE100566.STAT1.SET-2_cortistatin-A 215 bp overlap
STAT3 10 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 236 bp overlap
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 312 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 312 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 114 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 114 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 178 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 228 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 312 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 207 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 258 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 175 bp overlap
TFAP4 1 dataset
ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 312 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 233 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 103 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap