chr2 : 195,252,031 195,252,511
480 bp 71 TFs 0 linked genes
This 480 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:195,247,031 – 195,257,511
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ATF2 3 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif ES_0h ES_0h-ATF2_MA1632.2 10 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 137 bp overlap
ATF3 2 datasets
Motif DE_12h DE_12h-ATF3_MA0605.3 10 bp overlap
Motif ES_0h ES_0h-ATF3_MA0605.3 10 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BACH2 2 datasets
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
Motif ES_0h ES_0h-BACH2_MA1470.2 19 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF521IZR 380 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 217 bp overlap
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 130 bp overlap
ChIP K562 ENCFF923NJI 311 bp overlap
BRD4 1 dataset
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 214 bp overlap
CREB1 4 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 206 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 157 bp overlap
CREB3L4 2 datasets
Motif DE_12h DE_12h-CREB3L4_MA1475.2 9 bp overlap
Motif ES_0h ES_0h-CREB3L4_MA1475.2 9 bp overlap
CTCF 56 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 230 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 339 bp overlap
ChIP BE2C ENCFF757SRF 317 bp overlap
ChIP C4-2B ENCFF821XVN 480 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM23338 ENCFF531QOI 205 bp overlap
ChIP GM23338 ENCFF772DML 207 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 99 bp overlap
ChIP H9 ENCFF152GTF 243 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 194 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 152 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 233 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 145 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 251 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 335 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 154 bp overlap
ChIP LNCAP ENCFF700QXT 480 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 363 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 371 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 296 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 110 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 191 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 130 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 480 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 418 bp overlap
ChIP PC-3 ENCFF487TUI 468 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 304 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 303 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 163 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 140 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 101 bp overlap
ChIP endodermal cell ENCFF471YCZ 459 bp overlap
ChIP endodermal cell ENCFF471YCZ 269 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 331 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 209 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 175 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 286 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 353 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 129 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 213 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 250 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 156 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 242 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 156 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 193 bp overlap
ChIP neural progenitor cell ENCFF420RBO 400 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 266 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 223 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 280 bp overlap
ChIP BLaER1 ENCFF262VBH 226 bp overlap
ChIP BLaER1 ENCFF274GAT 143 bp overlap
ChIP BLaER1 ENCFF798NMV 417 bp overlap
Creb5 2 datasets
Motif DE_12h DE_12h-Creb5_MA0840.2 10 bp overlap
Motif ES_0h ES_0h-Creb5_MA0840.2 10 bp overlap
DMRTA1 2 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 2 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
ESR1 5 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 179 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 216 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 197 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 179 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 173 bp overlap
ETV2::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif ES_0h ES_0h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 5 datasets
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_24h DE_24h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif ES_0h ES_0h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif ES_0h ES_0h-ETV5FIGLA_MA1945.2 14 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif ES_0h ES_0h-FOS_MA1951.2 13 bp overlap
FOSB::JUN 2 datasets
Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap
Motif ES_0h ES_0h-FOSBJUN_MA1127.1 11 bp overlap
FOSB::JUNB 2 datasets
Motif DE_12h DE_12h-FOSBJUNB_MA1136.1 10 bp overlap
Motif ES_0h ES_0h-FOSBJUNB_MA1136.1 10 bp overlap
FOSL1::JUND 2 datasets
Motif DE_12h DE_12h-FOSL1JUND_MA1143.2 9 bp overlap
Motif ES_0h ES_0h-FOSL1JUND_MA1143.2 9 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1131.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUN_MA1131.2 10 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL2JUNB_MA1139.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUNB_MA1139.2 10 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUND_MA1145.2 10 bp overlap
FOXA1 1 dataset
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 125 bp overlap
FOXD2 3 datasets
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
HAND2 7 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 233 bp overlap
INSM1 1 dataset
Motif ES_0h ES_0h-INSM1_MA0155.1 12 bp overlap
JDP2 2 datasets
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
Motif ES_0h ES_0h-JDP2_MA0656.2 10 bp overlap
JUN 2 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap
JUN::JUNB 2 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap
Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap
JUND 2 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
Motif ES_0h ES_0h-JUND_MA0492.2 11 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 172 bp overlap
MEIS1 7 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MXI1 3 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
MYCN 1 dataset
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 195 bp overlap
NHLH2 2 datasets
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NR1D1 1 dataset
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif ES_0h ES_0h-NR1D2_MA1532.2 15 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
PAX3 1 dataset
Motif DE_12h DE_12h-PAX3_MA1546.2 14 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
RAD21 21 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 134 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 104 bp overlap
ChIP H1 ENCFF698EWO 189 bp overlap
ChIP H1 ENCFF967OJF 121 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 117 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 157 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 172 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 183 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 140 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 306 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 276 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 235 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 211 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 189 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 252 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 209 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 221 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 218 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 237 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 276 bp overlap
RARA 1 dataset
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
Rarb 1 dataset
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 273 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 273 bp overlap
SIX2 3 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
Motif DE_24h DE_24h-SIX2_MA1119.2 11 bp overlap
Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap
SP5 4 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBF1 3 datasets
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
Motif DE_24h DE_24h-SREBF1_MA0829.3 10 bp overlap
Motif ES_0h ES_0h-SREBF1_MA0829.3 10 bp overlap
SRY 2 datasets
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 287 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 151 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 195 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TFAP4::ETV1 5 datasets
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_24h DE_24h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
TWIST1 2 datasets
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
USF1 7 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap
Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 156 bp overlap
ChIP K562 ENCFF633EZB 265 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 235 bp overlap
USF2 2 datasets
ChIP GM12878 GSE97661.USF2.GM12878 192 bp overlap
ChIP WTC11 ENCFF139JAW 373 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 119 bp overlap
ZBTB24 1 dataset
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZNF211 2 datasets
Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap
Motif ES_0h ES_0h-ZNF211_MA1974.2 10 bp overlap
ZNF263 3 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF320 1 dataset
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF354C 3 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_24h DE_24h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 371 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 237 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF701 3 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap