chr2 : 163,713,856 163,714,271
415 bp 59 TFs 0 linked genes
This 415 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:163,708,856 – 163,719,271
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HCT-116_SERUM GSE30267.AFF4.HCT-116_SERUM 122 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 275 bp overlap
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 232 bp overlap
BRD4 2 datasets
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 196 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 154 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 203 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 157 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
EZH2 2 datasets
ChIP HCT116 ENCFF922BIG 406 bp overlap
ChIP HCT116 ENCFF922BIG 112 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 203 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 278 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 126 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 401 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 394 bp overlap
ChIP SK-N-SH ENCFF764OZD 235 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 310 bp overlap
ChIP DE DE-GATA4-2 288 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 157 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 315 bp overlap
GATA6 1 dataset
ChIP DE_D2 S55-DE-d2-GATA6-exp2 244 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 201 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 415 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 415 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 269 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 234 bp overlap
KMT2A 8 datasets
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 157 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 415 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 405 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 304 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 415 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 415 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 415 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 317 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 179 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 224 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 185 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94782.MYCN.Kelly 106 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 332 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 415 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 122 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 237 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 326 bp overlap
ChIP SK-N-SH ENCFF965AKM 259 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 143 bp overlap
OVOL3 1 dataset
ChIP HEK293 ENCFF898STB 182 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 380 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 209 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 415 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 191 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 330 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 113 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 215 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 80 bp overlap
RAD21 2 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 403 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 131 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 77 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 267 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 270 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 288 bp overlap
SMARCA4 5 datasets
ChIP NGP GSE134626.SMARCA4.NGP 204 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 167 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 261 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 55 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 371 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 73 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 65 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH ENCFF182EBB 171 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 182 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 304 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 160 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 391 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 351 bp overlap
ZNF10 3 datasets
ChIP HEK293 ENCFF611ZJI 58 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 115 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 161 bp overlap
ZNF189 3 datasets
ChIP HEK293 ENCFF638TIB 377 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 285 bp overlap
ChIP HEK293T GSE78099.ZNF189.HEK293T 154 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 254 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 415 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 214 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 183 bp overlap
ZNF440 1 dataset
ChIP HEK293T GSE78099.ZNF440.HEK293T 277 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 245 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 180 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 348 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 415 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 290 bp overlap