chr2 : 150,426,583 150,427,577
994 bp 114 TFs 0 linked genes
This 994 bp open chromatin element has no linked target genes and is bound by 114 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:150,421,583 – 150,432,577
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
ARGFX 1 dataset
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
Arx 1 dataset
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BRD4 6 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 172 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 200 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 238 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 829 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 237 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 220 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Bach1::Mafk 2 datasets
Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap
Motif DE_36h DE_36h-Bach1Mafk_MA0591.2 12 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 140 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 127 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 243 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 251 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 313 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 367 bp overlap
EP300 2 datasets
ChIP PC-3 GSE147455.EP300.PC-3 128 bp overlap
ChIP neural cell ENCFF442QNK 339 bp overlap
ETS1 1 dataset
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 201 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
Motif DE_36h DE_36h-FOXA1_MA0148.5 8 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 216 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 274 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 250 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 715 bp overlap
ChIP DE DE-FOXA2-2 872 bp overlap
FOXB1 2 datasets
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Motif DE_36h DE_36h-FOXB1_MA0845.1 11 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 663 bp overlap
ChIP DE DE-GATA4-2 651 bp overlap
Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 631 bp overlap
ChIP DE DE-GATA6-2 661 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 711 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 802 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 628 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 732 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 945 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 865 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 469 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLIS1 2 datasets
Motif DE_12h DE_12h-GLIS1_MA0735.2 15 bp overlap
Motif DE_36h DE_36h-GLIS1_MA0735.2 15 bp overlap
GLIS3 2 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Motif DE_36h DE_36h-GLIS3_MA0737.1 14 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR000BMG.HDAC2.K-562 116 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 123 bp overlap
ChIP RH4_DMSO-6H_bioMerck GSE116344.HDAC2.RH4_DMSO-6H_bioMerck 158 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA4 1 dataset
Motif DE_24h DE_24h-HOXA4_MA1496.2 7 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB4 1 dataset
Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 210 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 436 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 278 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 792 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 719 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 142 bp overlap
KMT2A 2 datasets
ChIP THP-1 GSE79899.KMT2A.THP-1 196 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 311 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LIN54 2 datasets
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
Lhx1 1 dataset
Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap
MAF 2 datasets
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
Motif DE_36h DE_36h-MAF_MA1520.2 13 bp overlap
MAFA 2 datasets
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
Motif DE_36h DE_36h-MAFA_MA1521.2 13 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 186 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 194 bp overlap
Mafb 2 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NFATC3 3 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 335 bp overlap
NR1D2 1 dataset
Motif DE_24h DE_24h-NR1D2_MA1532.2 15 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 239 bp overlap
NRL 2 datasets
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PAX2 1 dataset
Motif DE_24h DE_24h-PAX2_MA0067.3 16 bp overlap
PAX8 1 dataset
Motif DE_24h DE_24h-PAX8_MA2094.1 16 bp overlap
PGR 1 dataset
Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 198 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 272 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU6F1 1 dataset
Motif DE_24h DE_24h-POU6F1_MA1549.2 7 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Prdm4 2 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif DE_36h DE_36h-Prdm4_MA1647.3 11 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 181 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 144 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
RUVBL2 1 dataset
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 281 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 820 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 466 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 739 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 333 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 310 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 299 bp overlap
SMARCA4 6 datasets
ChIP NGP GSE134626.SMARCA4.NGP 131 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 228 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 157 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 235 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 473 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 189 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 702 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 740 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 311 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 386 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 101 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 224 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF16 2 datasets
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap