chr2 : 144,379,672 144,380,278
606 bp 73 TFs 0 linked genes
This 606 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:144,374,672 – 144,385,278
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 87 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 110 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 198 bp overlap
BCL6 2 datasets
Motif DE_36h DE_36h-BCL6_MA0463.3 13 bp overlap
Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap
BCL6B 2 datasets
Motif DE_36h DE_36h-BCL6B_MA0731.1 17 bp overlap
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
BRD4 7 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 158 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 224 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 448 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 171 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 592 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 230 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 292 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 561 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 606 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 446 bp overlap
CTCF 5 datasets
ChIP RH4 GSE83726.CTCF.RH4 550 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 269 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 162 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 175 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 479 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 67 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
EGR1 1 dataset
ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 232 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 157 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 112 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 479 bp overlap
FIGLA 1 dataset
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCFF867JAR 594 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 422 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 556 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 216 bp overlap
GATA6 5 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 258 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 391 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 472 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 354 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 410 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 376 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 446 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 345 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 215 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 606 bp overlap
IRF1 1 dataset
ChIP HAEC_TNFa_4h GSE89970.IRF1.HAEC_TNFa_4h 149 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 315 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 267 bp overlap
MED1 2 datasets
ChIP RH4 GSE83726.MED1.RH4 246 bp overlap
ChIP RH4 GSE83726.MED1.RH4 177 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 408 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 245 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 198 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 572 bp overlap
MYOD1 10 datasets
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 323 bp overlap
ChIP RD GSE137168.MYOD1.RD 259 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 308 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 534 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 556 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 203 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 276 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 110 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 320 bp overlap
MYOG 5 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 349 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 606 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 278 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 200 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 224 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 225 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 407 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 431 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 376 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 536 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 387 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 348 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 392 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 606 bp overlap
OLIG2 3 datasets
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 235 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 290 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 271 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 190 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 219 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF199JUI 267 bp overlap
Ptf1A 1 dataset
Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap
RAD21 3 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 204 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 594 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 281 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 209 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 320 bp overlap
RBM22 3 datasets
ChIP K-562 ENCSR848AOP.RBM22.K-562 448 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 416 bp overlap
ChIP K562 ENCFF629OUL 483 bp overlap
REL 1 dataset
Motif DE_48h DE_48h-REL_MA0101.1 10 bp overlap
RELA 3 datasets
Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap
ChIP KB GSE52469.RELA.KB 103 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 138 bp overlap
RUNX1 2 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 151 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 151 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 212 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 139 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 547 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 423 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 401 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 366 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 400 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 341 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 468 bp overlap
SNAI2 2 datasets
Motif DE_48h DE_48h-SNAI2_MA0745.3 8 bp overlap
ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 241 bp overlap
SNAI3 1 dataset
Motif DE_48h DE_48h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 279 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 408 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 210 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 194 bp overlap
STAT1 1 dataset
ChIP SET-2_cortistatin-A GSE100566.STAT1.SET-2_cortistatin-A 173 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 230 bp overlap
TAL1 2 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 525 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 117 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 169 bp overlap
TBX5 1 dataset
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 342 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 209 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 547 bp overlap
ZEB1 1 dataset
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZNF468 1 dataset
ChIP HEK293T GSE78099.ZNF468.HEK293T 201 bp overlap
ZNF75A 1 dataset
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_48h DE_48h-ZNF75D_MA1601.2 12 bp overlap
ZNF85 2 datasets
Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
ZSCAN16 1 dataset
Motif DE_48h DE_48h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap