chr2 : 131,425,244 131,425,586
342 bp 55 TFs 2 linked genes
This 342 bp open chromatin element is linked to GNAQP1 and ENSG00000284659 and is bound by 55 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
GNAQP1 377 bp At TSS Proximity
ENSG00000284659 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:131,420,244 – 131,430,586
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 207 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 224 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 294 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 306 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 342 bp overlap
BRD4 6 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 86 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 342 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 50 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 177 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 130 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 209 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 241 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 200 bp overlap
CTCF 2 datasets
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 259 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 151 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 236 bp overlap
ChIP delta-47 GSE70764.CTCFL.delta-47 326 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 342 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 244 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 98 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 149 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 69 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 342 bp overlap
ERG 4 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 208 bp overlap
ChIP K-562 GSE23730.ERG.K-562 226 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 254 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 244 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 254 bp overlap
EZH1 1 dataset
ChIP ProEs_SHEZH2 GSE59087.EZH1.ProEs_SHEZH2 70 bp overlap
EZH2 40 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 260 bp overlap
ChIP A673 ENCFF790MVL 144 bp overlap
ChIP A673 ENCFF955JRZ 187 bp overlap
ChIP GM23248 ENCFF404ZHM 120 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 237 bp overlap
ChIP GM23338 ENCFF613YON 184 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 198 bp overlap
ChIP H1 ENCFF232NZA 342 bp overlap
ChIP H1 ENCFF232NZA 234 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 246 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 326 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 87 bp overlap
ChIP HepG2 ENCFF912EIW 276 bp overlap
ChIP HepG2 ENCFF912EIW 68 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 60 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 342 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 168 bp overlap
ChIP astrocyte ENCFF365JTP 342 bp overlap
ChIP astrocyte ENCFF365JTP 335 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 242 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 281 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 172 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 96 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 179 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 288 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 134 bp overlap
ChIP hESC GSE113817.EZH2.hESC 342 bp overlap
ChIP hepatocyte ENCFF552DZB 336 bp overlap
ChIP hepatocyte ENCFF552DZB 119 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 242 bp overlap
ChIP keratinocyte ENCFF070STK 54 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 233 bp overlap
ChIP myotube ENCFF857GWB 198 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 216 bp overlap
ChIP neural progenitor cell ENCFF018MKA 342 bp overlap
ChIP neural progenitor cell ENCFF018MKA 154 bp overlap
ChIP neural progenitor cell ENCFF472NFV 203 bp overlap
ChIP neural progenitor cell ENCFF472NFV 181 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 209 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 296 bp overlap
EZH2_phosphoT487 3 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 178 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 297 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 136 bp overlap
HDAC1 2 datasets
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_4-OHT_clone14 267 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 188 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 215 bp overlap
JARID2 7 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 303 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 300 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 323 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 264 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 310 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 203 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 280 bp overlap
KDM4A 4 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 327 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 306 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 279 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 216 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 166 bp overlap
KMT2A 2 datasets
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 66 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 342 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 237 bp overlap
MED1 3 datasets
ChIP MCF-7_SHCTR GSE60270.MED1.MCF-7_SHCTR 156 bp overlap
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 183 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 202 bp overlap
MYC 2 datasets
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 186 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 131 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 342 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 342 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 301 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 232 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 304 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 321 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 342 bp overlap
RAD21 1 dataset
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 181 bp overlap
REST 1 dataset
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 129 bp overlap
RNF2 4 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 52 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 235 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 231 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 150 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 342 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 342 bp overlap
RUNX1 2 datasets
ChIP AML GSE111821.RUNX1.AML 132 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 116 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 326 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 296 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 199 bp overlap
SMARCB1 5 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 207 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 212 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 205 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 245 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 208 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 247 bp overlap
SMARCD3 1 dataset
ChIP MCF-7_KO GSE124225.SMARCD3.MCF-7_KO 310 bp overlap
SMC1A 1 dataset
ChIP MCF-7 GSE115602.SMC1A.MCF-7 260 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 342 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 342 bp overlap
SUZ12 12 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 269 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 342 bp overlap
ChIP GM12878 ENCFF498QAM 248 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 216 bp overlap
ChIP H1 ENCFF881NFR 294 bp overlap
ChIP H1 ENCFF881NFR 342 bp overlap
ChIP H1 ENCFF881NFR 267 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 196 bp overlap
ChIP K562 ENCFF397TBJ 232 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 205 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 271 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 201 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 284 bp overlap
YY1 1 dataset
ChIP ALL GSE145549.YY1.ALL 195 bp overlap
ZBTB14 1 dataset
ChIP HEK293 GSE76494.ZBTB14.HEK293 173 bp overlap
ZBTB26 4 datasets
ChIP HEK293 ENCFF752POA 262 bp overlap
ChIP HEK293 ENCFF752POA 210 bp overlap
ChIP HEK293 ENCFF752TCU 342 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 100 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 284 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 119 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 97 bp overlap