chr2 : 58,206,941 – 58,207,510

569 bp 52 TFs 1 linked gene

This 569 bp open chromatin element is linked to FANCL and is bound by 52 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
FANCL		6.1 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

52 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 471 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 259 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 110 bp overlap

BRD4 3 datasets

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 215 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 293 bp overlap

ChIP NMC24335 GSE96775.BRD4.NMC24335 346 bp overlap

CHD7 3 datasets

ChIP H1 ENCFF126NLU 424 bp overlap

ChIP H1 ENCFF126NLU 223 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 139 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 304 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 411 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 516 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 101 bp overlap

FOXB1 1 dataset

Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap

JUN 2 datasets

ChIP ESC S24-ESC-d0-JUN-exp1 283 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 252 bp overlap

MAF 1 dataset

Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap

MAFA 1 dataset

Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap

MAX 3 datasets

ChIP H1 ENCFF601FOM 315 bp overlap

ChIP H1 ENCFF914VQY 154 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 474 bp overlap

MEIS1 1 dataset

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 234 bp overlap

MXI1 1 dataset

Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap

MYC 2 datasets

ChIP H1 ENCFF794ZJT 265 bp overlap

ChIP WA01 ENCSR000EBY.MYC.WA01 129 bp overlap

NANOG 8 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 569 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 259 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 187 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 197 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 243 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 158 bp overlap

ChIP hESC GSE18292.NANOG.hESC 91 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHF.NR3C1.A-549 139 bp overlap

NR4A1 1 dataset

Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif ES_0h ES_0h-NR4A2_MA0160.3 8 bp overlap

NUTM1 1 dataset

ChIP NMC24335 GSE96775.NUTM1.NMC24335 319 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU3F2 1 dataset

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 475 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 355 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 315 bp overlap

RBM22 2 datasets

ChIP HepG2 ENCFF292RVQ 451 bp overlap

ChIP HepG2 ENCFF561IAJ 465 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 207 bp overlap

SIN3A 1 dataset

ChIP WA01 ENCSR000BIS.SIN3A.WA01 174 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 291 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 416 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 208 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap

SOX18 1 dataset

Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 130 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 245 bp overlap

SOX9 1 dataset

Motif ES_0h ES_0h-SOX9_MA0077.2 8 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 249 bp overlap

SUPT5H 1 dataset

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 235 bp overlap

SUPT6H 1 dataset

ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 301 bp overlap

Sox5 1 dataset

Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 194 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 152 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 207 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 356 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 183 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 264 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 270 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 173 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 477 bp overlap

ZNF532 2 datasets

ChIP NMC24335 GSE96775.ZNF532.NMC24335 569 bp overlap

ChIP WTC11 ENCFF373VBX 285 bp overlap

ZNF558 1 dataset

Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap

ZSCAN5C 1 dataset

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 335 bp overlap