chr20 : 25,236,484 25,236,857
373 bp 61 TFs 1 linked gene
This 373 bp open chromatin element is linked to ENSG00000277938 and is bound by 61 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000277938 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:25,231,484 – 25,241,857
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 250 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 179 bp overlap
AR 4 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 178 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 100 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 138 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 364 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 324 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 229 bp overlap
BRD2 3 datasets
ChIP NCI-H23 GSE104481.BRD2.NCI-H23 118 bp overlap
ChIP NCI-H23 GSE113714.BRD2.NCI-H23 96 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 373 bp overlap
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 291 bp overlap
BRD4 15 datasets
ChIP 402-91 GSE111253.BRD4.402-91 117 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 216 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 364 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 366 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 318 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 373 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 366 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 373 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 373 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 328 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 192 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 225 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 51 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 373 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 373 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 373 bp overlap
CREBBP 3 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 123 bp overlap
ChIP PC-3 GSE147455.CREBBP.PC-3 186 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 141 bp overlap
CTCF 2 datasets
ChIP HepG2 ENCFF757EKU 292 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
EED 2 datasets
ChIP HepG2 ENCFF347CCA 266 bp overlap
ChIP ProEs GSE59087.EED.ProEs 89 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 152 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 351 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 188 bp overlap
EZH2 3 datasets
ChIP HepG2 ENCFF912EIW 373 bp overlap
ChIP HepG2 ENCFF912EIW 99 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 296 bp overlap
FOS 2 datasets
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 367 bp overlap
ChIP MNNG-HOS GSE74230.FOS.MNNG-HOS 235 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 175 bp overlap
GATA6 3 datasets
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 269 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 248 bp overlap
ChIP foregut GSE117136.GATA6.foregut 273 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 222 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 373 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 223 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 237 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 212 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 373 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 332 bp overlap
MED1 7 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 333 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 315 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 244 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 348 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 180 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 373 bp overlap
ChIP SUM159PT_300nMJQ1_24h GSE87418.MED1.SUM159PT_300nMJQ1_24h 82 bp overlap
MEF2D 1 dataset
ChIP K562 ENCFF392LDT 194 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 291 bp overlap
MTERF4 1 dataset
ChIP HepG2 ENCFF831NAM 373 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 175 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 373 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 293 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 271 bp overlap
NFE2L2 1 dataset
ChIP A-549 GSE113497.NFE2L2.A-549 347 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 301 bp overlap
PAX8 1 dataset
ChIP OVSAHO GSE79893.PAX8.OVSAHO 57 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 236 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 373 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 245 bp overlap
RBFOX2 2 datasets
ChIP K562 ENCFF196WTG 373 bp overlap
ChIP K562 ENCFF967GRF 373 bp overlap
RUNX1 3 datasets
ChIP AML GSE111821.RUNX1.AML 176 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 230 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 167 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 99 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 373 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 302 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 202 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 278 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 64 bp overlap
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 92 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 340 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 283 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 181 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 204 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 144 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 373 bp overlap
ZBTB6 3 datasets
ChIP HEK293 ENCFF881ECZ 276 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 187 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 231 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 325 bp overlap
ZEB1 1 dataset
ChIP MIA-PaCa-2 GSE88734.ZEB1.MIA-PaCa-2 360 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 373 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 373 bp overlap