chr20 : 8,431,945 8,432,415
470 bp 61 TFs 0 linked genes
This 470 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:8,426,945 – 8,437,415
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
ATRX 2 datasets
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 223 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 282 bp overlap
BRD4 4 datasets
ChIP SW480 GSE110473.BRD4.SW480 379 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 393 bp overlap
ChIP hESC GSE33281.BRD4.hESC 71 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 293 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 253 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 267 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 368 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap
CTCF 3 datasets
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 308 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 236 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 259 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 307 bp overlap
ELF1 2 datasets
ChIP A-549 GSE122203.ELF1.A-549 151 bp overlap
ChIP SK-N-SH ENCFF871YHY 340 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF451CNG 321 bp overlap
ChIP SK-N-SH ENCFF829RWA 111 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 240 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 226 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 331 bp overlap
FOXA1 1 dataset
ChIP LS180 GSE140533.FOXA1.LS180 114 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 344 bp overlap
GABPA 1 dataset
ChIP SK-N-SH ENCSR000BTG.GABPA.SK-N-SH 135 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 262 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 168 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 135 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 235 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 370 bp overlap
JUN 1 dataset
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 286 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 300 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 220 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 217 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 165 bp overlap
MAX 4 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 341 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 225 bp overlap
ChIP SK-N-SH ENCFF285LXR 411 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 123 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 168 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 208 bp overlap
MYC 3 datasets
ChIP NB69 GSE138295.MYC.NB69 256 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 327 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 470 bp overlap
MYCN 10 datasets
ChIP BE2C GSE80151.MYCN.BE2C 409 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 461 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 370 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 352 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 470 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 349 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 220 bp overlap
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 159 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 408 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 360 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 220 bp overlap
NCOR1 2 datasets
ChIP LS180 GSE39277.NCOR1.LS180 118 bp overlap
ChIP LS180_125 GSE39277.NCOR1.LS180_125 146 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 349 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 218 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 251 bp overlap
ChIP Ishikawa ENCFF029AAD 51 bp overlap
ChIP SK-N-SH ENCFF965AKM 226 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 287 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 419 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 107 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 443 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 115 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 417 bp overlap
POLR2A 6 datasets
ChIP SK-N-SH ENCFF683PFH 217 bp overlap
ChIP sigmoid colon ENCFF725QFT 291 bp overlap
ChIP sigmoid colon ENCFF748YVT 278 bp overlap
ChIP sigmoid colon ENCFF748YVT 77 bp overlap
ChIP sigmoid colon ENCFF754JQR 362 bp overlap
ChIP sigmoid colon ENCFF754JQR 160 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 135 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 78 bp overlap
RAD21 2 datasets
ChIP SK-N-SH ENCFF747MAS 232 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 204 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 300 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 363 bp overlap
REST 3 datasets
ChIP SK-N-SH ENCFF861MKH 245 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 201 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 185 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 140 bp overlap
RXRA 2 datasets
ChIP SK-N-SH ENCFF893DLM 310 bp overlap
ChIP SK-N-SH ENCSR000BVG.RXRA.SK-N-SH 187 bp overlap
SIN3A 3 datasets
ChIP SK-N-SH ENCFF931NFD 289 bp overlap
ChIP SK-N-SH ENCFF931NFD 88 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 183 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 103 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 158 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 194 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 188 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 112 bp overlap
SMC3 2 datasets
ChIP SK-N-SH ENCFF791WFB 241 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 113 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 284 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 407 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 164 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 218 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 178 bp overlap
ChIP SK-N-SH ENCFF270OWF 263 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 145 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 145 bp overlap
ChIP SK-N-SH ENCFF754TJT 307 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 200 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 418 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 418 bp overlap
USF1 2 datasets
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 114 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 117 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 149 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 101 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 213 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 236 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 209 bp overlap