chr18 : 64,175,410 – 64,176,016

606 bp 93 TFs 0 linked genes

This 606 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

93 transcription factors

ARNT2 2 datasets

Motif DE_12h DE_12h-ARNT2_MA1464.2 8 bp overlap

Motif ES_0h ES_0h-ARNT2_MA1464.2 8 bp overlap

ARNT::HIF1A 2 datasets

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap

Arnt 2 datasets

Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap

Motif ES_0h ES_0h-Arnt_MA0004.1 6 bp overlap

Arntl 2 datasets

Motif DE_12h DE_12h-Arntl_MA0603.2 8 bp overlap

Motif ES_0h ES_0h-Arntl_MA0603.2 8 bp overlap

BARX2 1 dataset

Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap

BHLHE40 4 datasets

Motif DE_12h DE_12h-BHLHE40_MA0464.3 8 bp overlap

Motif ES_0h ES_0h-BHLHE40_MA0464.3 8 bp overlap

ChIP GM12878 ENCFF521IZR 241 bp overlap

ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 257 bp overlap

Bcl11B 1 dataset

Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 260 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXB1 1 dataset

Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXD3 1 dataset

Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 50 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 85 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 400 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 99 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 250 bp overlap

HES1 2 datasets

Motif DE_12h DE_12h-HES1_MA1099.3 8 bp overlap

Motif ES_0h ES_0h-HES1_MA1099.3 8 bp overlap

HES2 2 datasets

Motif DE_12h DE_12h-HES2_MA0616.3 9 bp overlap

Motif ES_0h ES_0h-HES2_MA0616.3 9 bp overlap

HES5 2 datasets

Motif DE_12h DE_12h-HES5_MA0821.2 10 bp overlap

Motif ES_0h ES_0h-HES5_MA0821.2 10 bp overlap

HES6 2 datasets

Motif DE_12h DE_12h-HES6_MA1493.1 10 bp overlap

Motif ES_0h ES_0h-HES6_MA1493.1 10 bp overlap

HES7 2 datasets

Motif DE_12h DE_12h-HES7_MA0822.1 12 bp overlap

Motif ES_0h ES_0h-HES7_MA0822.1 12 bp overlap

HEY1 2 datasets

Motif DE_12h DE_12h-HEY1_MA0823.1 10 bp overlap

Motif ES_0h ES_0h-HEY1_MA0823.1 10 bp overlap

HEY2 2 datasets

Motif DE_12h DE_12h-HEY2_MA0649.2 9 bp overlap

Motif ES_0h ES_0h-HEY2_MA0649.2 9 bp overlap

HIF1A 1 dataset

Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

INSM1 1 dataset

Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap

Isl1 1 dataset

Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap

KLF4 1 dataset

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

Lef1 1 dataset

Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap

MAX 4 datasets

Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap

Motif ES_0h ES_0h-MAX_MA0058.4 6 bp overlap

ChIP H1 ENCFF914VQY 357 bp overlap

ChIP WTC11 ENCFF223QFY 490 bp overlap

MNT 2 datasets

Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap

Motif ES_0h ES_0h-MNT_MA0825.2 6 bp overlap

MYC 2 datasets

Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap

Motif ES_0h ES_0h-MYC_MA0147.4 8 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

Mlxip 2 datasets

Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap

Motif ES_0h ES_0h-Mlxip_MA0622.2 6 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 114 bp overlap

NR2F1 1 dataset

Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap

Npas2 2 datasets

Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap

Motif ES_0h ES_0h-Npas2_MA0626.2 8 bp overlap

Nr2f6 1 dataset

Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU5F1 5 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 439 bp overlap

ChIP GM23338 ENCFF333SNB 311 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 606 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 376 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 280 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm4 1 dataset

Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

REL 1 dataset

Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap

RELA 1 dataset

Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap

RFX4 2 datasets

Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap

Motif ES_0h ES_0h-RFX4_MA0799.3 13 bp overlap

Rfx6 2 datasets

Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap

Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 291 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 407 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOHLH2 2 datasets

Motif DE_12h DE_12h-SOHLH2_MA1560.2 8 bp overlap

Motif ES_0h ES_0h-SOHLH2_MA1560.2 8 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 286 bp overlap

Smad4 1 dataset

Motif DE_12h DE_12h-Smad4_MA1153.2 7 bp overlap

TCF3 2 datasets

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap

TCF7 1 dataset

Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TFEB 2 datasets

Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap

Motif ES_0h ES_0h-TFEB_MA0692.2 8 bp overlap

TFEC 2 datasets

Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap

Motif ES_0h ES_0h-TFEC_MA0871.3 8 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

Thap11 2 datasets

Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap

Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap

VENTX 1 dataset

Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap

Wt1 2 datasets

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap

YY1 3 datasets

ChIP GM12892 ENCSR000BLT.YY1.GM12892 108 bp overlap

ChIP H1 ENCFF524BTL 337 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 246 bp overlap

Yy1 2 datasets

Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap

Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZFP42 3 datasets

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap

ZNF211 1 dataset

Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap

ZNF417 1 dataset

Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap

ZNF528 2 datasets

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

ZNF682 1 dataset

Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap

ZNF75A 2 datasets

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap

ZNF8 1 dataset

Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zfp961 1 dataset

Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap