chr18 : 5,582,137 – 5,582,385

248 bp 69 TFs 0 linked genes

This 248 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

69 transcription factors

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 248 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap

Ascl2 2 datasets

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

Motif DE_48h DE_48h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap

BRD2 1 dataset

ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 183 bp overlap

BRD4 3 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 165 bp overlap

ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 133 bp overlap

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 210 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 198 bp overlap

DMRTA2 2 datasets

Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap

Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

Dux 1 dataset

Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap

EBF1 1 dataset

ChIP MUTUL GSE75503.EBF1.MUTUL 68 bp overlap

FOSL2 1 dataset

ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 248 bp overlap

FOXA1 1 dataset

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 59 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 248 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 180 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 202 bp overlap

HNF4A 1 dataset

Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap

HNF4G 1 dataset

Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap

KDM4A 1 dataset

ChIP WA01 ENCSR000AVC.KDM4A.WA01 189 bp overlap

LIN54 1 dataset

Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap

MAZ 1 dataset

ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 108 bp overlap

MED1 1 dataset

ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 139 bp overlap

MED26 1 dataset

ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 173 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap

MYOD1 1 dataset

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap

MYOG 2 datasets

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

Motif DE_48h DE_48h-MYOG_MA0500.3 8 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 248 bp overlap

NELFE 2 datasets

ChIP HeLa GSE125534.NELFE.HeLa 172 bp overlap

ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 116 bp overlap

NEUROG2 2 datasets

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 209 bp overlap

ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 188 bp overlap

NHLH1 2 datasets

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

Motif DE_48h DE_48h-NHLH1_MA0048.3 9 bp overlap

NHLH2 2 datasets

Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap

Motif DE_48h DE_48h-NHLH2_MA1529.2 16 bp overlap

NR3C1 1 dataset

ChIP SUM159PT GSE152203.NR3C1.SUM159PT 85 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap

Olig2 2 datasets

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 211 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 105 bp overlap

RBBP5 2 datasets

ChIP H1 ENCFF905HFL 248 bp overlap

ChIP WA01 ENCSR000AQC.RBBP5.WA01 248 bp overlap

RBPJ 3 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

Runx1 1 dataset

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

SIX1 3 datasets

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap

ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 144 bp overlap

SIX2 5 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 248 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 229 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 248 bp overlap

SIX4 1 dataset

ChIP WTC11 ENCFF891HYW 248 bp overlap

SMARCA4 4 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 146 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 248 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 248 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 211 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 247 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 167 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 233 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 124 bp overlap

SUPT5H 2 datasets

ChIP HeLa GSE125534.SUPT5H.HeLa 133 bp overlap

ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 175 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 238 bp overlap

Tcf12 2 datasets

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap

Thap11 3 datasets

Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap

Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap

Motif DE_48h DE_48h-Thap11_MA1573.2 14 bp overlap

Twist2 2 datasets

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap

USF1 2 datasets

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

Motif DE_48h DE_48h-USF1_MA0093.4 10 bp overlap

YY1 1 dataset

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 110 bp overlap

ZBTB42 1 dataset

ChIP HEK293 GSE76494.ZBTB42.HEK293 234 bp overlap

ZEB2 1 dataset

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 225 bp overlap

ZNF184 2 datasets

ChIP HEK293T GSE78099.ZNF184.HEK293T 223 bp overlap

ChIP WTC11 ENCFF352POG 248 bp overlap

ZNF211 3 datasets

Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap

Motif DE_36h DE_36h-ZNF211_MA1974.2 10 bp overlap

Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 248 bp overlap

ZNF394 2 datasets

ChIP HEK293 ENCFF236OPX 214 bp overlap

ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 248 bp overlap

ZNF449 3 datasets

Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap

Motif DE_48h DE_48h-ZNF449_MA1656.2 10 bp overlap

ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 236 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 229 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 183 bp overlap

ZNF467 1 dataset

ChIP HEK293 GSE76494.ZNF467.HEK293 161 bp overlap

ZNF549 2 datasets

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap

ZNF674 1 dataset

ChIP HEK293T GSE78099.ZNF674.HEK293T 240 bp overlap

ZNF692 1 dataset

ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 181 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZNF75D 1 dataset

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap

ZNF770 4 datasets

Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap

Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap

Motif DE_48h DE_48h-ZNF770_MA2099.1 8 bp overlap

ChIP HEK293 GSE76494.ZNF770.HEK293 148 bp overlap

ZXDB 1 dataset

ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 104 bp overlap