chr18 : 4,358,669 – 4,358,959

290 bp 77 TFs 0 linked genes

This 290 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

77 transcription factors

ASCL1 2 datasets

Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap

Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 290 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 290 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 223 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

BCL6B 1 dataset

Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap

BRD4 2 datasets

ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 151 bp overlap

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 184 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 103 bp overlap

CTBP2 2 datasets

ChIP H1 ENCFF329MAX 290 bp overlap

ChIP WA01 ENCSR000EUO.CTBP2.WA01 290 bp overlap

CTCF 1 dataset

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF680YXW 218 bp overlap

EED 1 dataset

ChIP ProEs GSE59087.EED.ProEs 131 bp overlap

EP300 2 datasets

ChIP H1 ENCFF927IYK 270 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 216 bp overlap

ERF::FOXI1 1 dataset

Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap

ERG 1 dataset

ChIP VCaP GSE49091.ERG.VCaP 100 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

EZH1 1 dataset

ChIP ProEs GSE59087.EZH1.ProEs 119 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FERD3L 1 dataset

Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

GABPA 1 dataset

ChIP WA01 ENCSR000BIW.GABPA.WA01 126 bp overlap

Gfi1B 1 dataset

Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap

HDAC2 4 datasets

ChIP H1 ENCFF353UJQ 290 bp overlap

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 246 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 225 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

IKZF1 1 dataset

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

IKZF2 2 datasets

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Lef1 1 dataset

Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap

MAX 1 dataset

ChIP H1 ENCFF914VQY 290 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

NANOG 5 datasets

ChIP H1 ENCFF747ZPQ 239 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 247 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 198 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 259 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 189 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

PGR 1 dataset

ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 228 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 168 bp overlap

POU5F1 1 dataset

ChIP BG03 GSE21614.POU5F1.BG03 189 bp overlap

RAD21 1 dataset

ChIP H1 ENCFF698EWO 241 bp overlap

RARA 1 dataset

Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 167 bp overlap

Rarb 1 dataset

Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap

SIN3A 2 datasets

ChIP WA01 ENCSR000BIS.SIN3A.WA01 163 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 176 bp overlap

SMAD1 1 dataset

ChIP BG03 GSE36578.SMAD1.BG03 239 bp overlap

SMAD3 2 datasets

ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 130 bp overlap

SMARCA4 2 datasets

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 98 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap

SNAI1 1 dataset

Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 91 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 237 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 290 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 247 bp overlap

TBX21 1 dataset

ChIP GM12878 ENCSR739IHN.TBX21.GM12878 106 bp overlap

TCF12 2 datasets

Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 155 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TCF4 1 dataset

Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 290 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 146 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

TP53 1 dataset

ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 153 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 290 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 269 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZIC1 1 dataset

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 275 bp overlap

ZNF416 1 dataset

Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 269 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 239 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 277 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF667 1 dataset

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap